Intestinibaculum porci: SG0102_24520
Help
Entry
SG0102_24520 CDS
T05736
Symbol
pbpB
Name
(GenBank) penicillin-binding protein 2B
Organism
ebm
Intestinibaculum porci
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
BBH27518
UniProt:
A0A3G9JSS7
LinkDB
All DBs
Position
complement(2616398..2618476)
Genome browser
AA seq
692 aa
AA seq
DB search
MFFAFFIFLLIVNIVYLCVSGKGLISQENIRDYNKERGGGRVTKIDYATRGTIYSSDGEV
IAKDVKRYNLYAILSKTRTTADHKPAYVVNKEKTAAQLAKILGANKDYLLKKLDTKSYQV
SFGNVGNNLSSIVKAKIEALNLPGLEFTEVSSRNYTFGDFASYEVGYASNTADDSQQVVG
KMGLEKSYNDYLTGTNGKVVYLRDSKGNTLPNGVLSKTSSVSGNDVHLTIDSDLQTQLDS
LMRDFVGIARPRHATAAIMEAKTGRMLAVSNYPSFDPNKRNMKSYNDLFLNGAYECGSVF
KPFVYGNALTDKVLDINDYYQSGSFYYKGGTKPIRDTNKVGWGTITFAEGLYRSSNTAIC
NILKSHTNMKSLVSDYNSLGFFKSSTVDGLACGSGVAAFDGKTKNAEWYTTGFGQGSSVT
PFQLLRAYSAFANDGKMVSPYFVDSVVNLRTKKKIYTGKTVFSEKIFPSSAVKTVKYLLY
GVTHNKAGTVHSYYQDSPNDIIGKSGTGQVVINGAYSKSINSHSFCGMAPYNNPKVVFMI
TWVNATNNTKDAATVIKGITKSALNKLNESSKKVKTISYNLPNFMNQSVTYAKSQLSKAG
LSPIVIGDGTSVIGQYPDAKTTITNSTRVMFATNGAKITMPSMVGWSRKEAEAFGSLAGV
NITVSGAGTIYKQNVEKGTTLKSKQTIKVYAS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgctttctttattttcctcttaattgttaatattgtttacctttgtgtctct
gggaaaggtttgatttctcaggaaaatattcgtgattacaacaaggagcgcggcggcggc
agggtcacgaagattgattatgcgacgcgaggaacaatttattctagcgatggggaagtc
atcgctaaagatgtgaaacgttataacctttatgcgattctctcgaaaacgagaacaacg
gctgatcataaacctgcttacgtggtgaataaagagaagacagcggcgcagttagcgaaa
atcttaggcgctaataaagattatctgcttaaaaaactagatacgaaaagttatcaggtc
agctttggaaatgtcggcaataacctctcttcgattgtcaaagcgaagattgaggctctc
aatttaccaggactagaatttaccgaagtatcttcccgtaactatacttttggggatttc
gcttcttatgaagttggctatgcctctaatacggcggatgacagccagcaggttgttggc
aagatgggcttagagaaaagctataatgactatctgaccgggacgaatggcaaagttgtg
tatttacgtgactctaagggcaataccttgcctaatggggtgttaagtaaaaccagctcg
gtgagcgggaatgatgtgcatctgacgattgatagtgatttgcagacgcagttagattcg
ttaatgcgtgattttgtcggtattgcgcggccccgtcatgcgacagccgccatcatggaa
gcgaagaccggacggatgttagctgtatcgaattatccatcctttgatccgaataagcgt
aatatgaagagttacaatgatctcttccttaatggagcctatgaatgtgggtcagttttc
aaaccatttgtttatggcaatgccttgacggataaagttttagatattaatgattactat
cagtccggcagtttctattataaaggaggcacaaaacctattcgtgacacaaacaaagtc
ggctgggggacgattaccttcgcagaagggctctatcgttcatccaataccgcgatttgt
aatatcttaaaatcgcataccaatatgaaatcattggtgtcagattataactcccttggt
ttctttaagtcttcgacagttgatggcttagcctgcggcagcggggtggcagcgtttgat
ggcaagacgaaaaacgccgagtggtacacgactgggtttggtcaaggttcttcggtaacg
ccattccagttattaagagcgtattcagcctttgccaatgacggcaagatggtatcccca
tacttcgtcgacagcgtggtgaatttgcggacgaaaaagaaaatttatacgggtaaaact
gtctttagcgaaaagatcttcccttcttctgccgtgaagaccgtgaagtatctgctttat
ggggttactcataataaagctgggacggtgcattcttactatcaggattcgcctaatgat
atcattgggaaatccgggactggtcaggtcgttattaatggggcgtattcaaagtcgatc
aactcccattcattctgcgggatggcgccttataacaatcctaaagtcgtctttatgatt
acctgggtcaatgcgaccaacaataccaaggatgcggctacggtcatcaaaggcattacg
aaatcagccttaaataaattgaatgaatcaagcaagaaagtgaagacgatttcttataac
ttaccaaactttatgaatcagtcggtcacttatgcgaaatctcagttatcgaaagcaggc
ttatcaccgattgtcatcggtgatggcacaagtgtcatcggacagtatccggatgcgaaa
acgacgattaccaactcgacgcgagtcatgttcgccacgaatggagcgaagatcacgatg
ccatcgatggtgggctggtctcgtaaagaggcggaagccttcggcagcttggccggggtg
aatattactgtttccggagcgggaacgatctataaacaaaatgtagaaaagggcacaacc
ctgaaaagtaaacagacgatcaaggtttatgcttcttag
DBGET
integrated database retrieval system