Intestinibaculum porci: SG0102_28460
Help
Entry
SG0102_28460 CDS
T05736
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SG0102_28460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ebm01007
]
SG0102_28460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebm03016
]
SG0102_28460 (lysS)
Enzymes [BR:
ebm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SG0102_28460 (lysS)
Amino acid related enzymes [BR:
ebm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SG0102_28460 (lysS)
Transfer RNA biogenesis [BR:
ebm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SG0102_28460 (lysS)
Prokaryotic type
Other AARSs
SG0102_28460 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBH27912
UniProt:
A0A3G9JC41
LinkDB
All DBs
Position
complement(3028932..3030425)
Genome browser
AA seq
497 aa
AA seq
DB search
MAERKFTQQEQVRRQKLEELKALGIDPFGQRYDVEDYTKDLREAYGSCTKEELEEKKVMV
KMAGRIMRRRRKGKVAFMDINDRYGKIQLYVRKDTVGEDVYEIVKRGDIGDIIGVEGELM
LTDTGELTVRVEKYTHLTKALRPLPEKFHGLTDTEERYRRRYLDLIMNEEARKVAFTRPK
IVRSIQRYLDAKNYVEVETPMMNSILGGAAAKPFITHFNALDTDFYLRIATELNLKRLIV
GGMDAVYEIGRMFRNEGMDKTHNPEFTTIEVYKAFSDLEGMMDLTEGIVSQAAMDVNGTY
EIDYKGHHFSLAPGFKRISMVDAIKEKTGIDFSQDLSFEEAKKLAEEHEIEVEPHFAYGH
IVNAFFEKYVEETIVEPTFVYGHPIEISPLAKKNLEDPRWTQRFELFICGNEYANAFTEL
NDPIDQYERFENQLKERELGNDEANEMDTDYVEALEYGMPPTGGMGMGIDRLTMLLTGQE
TIREVILFPAMKPNGDK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagagagaaaatttactcagcaggaacaagtgcgcagacagaagcttgaagaatta
aaagcactgggcattgatccatttggacagcgttatgacgttgaagattacacaaaagat
ttacgtgaagcttatggctcatgtacaaaagaagaattagaagaaaagaaagtcatggtt
aaaatggctggtcgtatcatgagaagaagacgtaaagggaaagtcgctttcatggatatt
aacgaccgttatggcaagatccagttatacgtgcgtaaagataccgttggtgaagacgta
tatgaaatcgttaaacgtggtgatatcggtgatatcatcggtgttgaaggggaattaatg
ttaacggatacaggagaattaactgtccgtgttgaaaaatatacccatttaacaaaagca
ttaagaccacttccagaaaaattccatggtttaacggatacggaagaaagatatcgtcgc
agatacttagacttaattatgaacgaagaagcccgtaaagtagctttcacaagaccaaag
atcgtccgttccattcagcgttacttagatgcgaaaaactatgtcgaagttgaaacacca
atgatgaactccatcttaggtggtgcagctgcaaaaccattcatcacacatttcaatgcc
ttagatacagatttctatttaagaattgcgacagagttaaacttaaagagattaattgtc
ggcggaatggatgccgtttatgaaatcggcagaatgttcagaaatgaaggaatggataaa
acccataaccctgaattcacaaccatcgaagtatataaagcattctctgatcttgaaggc
atgatggacttaacggaaggcatcgtttctcaggccgctatggatgttaatggcacttat
gaaattgactataaaggtcatcacttctcattagccccaggcttcaagagaatctctatg
gttgatgccatcaaagaaaaaacaggcattgatttctcacaggatttaagctttgaagaa
gctaagaaattagcagaagaacatgaaatcgaagttgaaccacacttcgcttatggtcat
atcgtcaatgctttctttgaaaaatatgtcgaagaaacaatcgttgaaccaaccttcgta
tatggtcatccaatcgaaatctcaccattagctaagaagaacttagaagatccacgctgg
acacagcgtttcgaattattcatctgcggtaatgaatatgcgaatgcctttaccgaatta
aacgatccaatcgatcagtatgaaagattcgaaaaccagttaaaggaaagagaacttggg
aacgatgaagccaacgaaatggataccgactatgttgaagcactggaatatggtatgcca
ccaacaggtggtatgggtatgggtattgaccgtttaactatgcttttaacaggtcaggaa
accatccgtgaagtcatcttattcccagctatgaaacctaacggagataaataa
DBGET
integrated database retrieval system
