Enterobacterales bacterium endosymbiont of Anomoneura mori: SSAmo_1000
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Entry
SSAmo_1000 CDS
T10774
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ebo Enterobacterales bacterium endosymbiont of Anomoneura mori
Pathway
ebo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ebo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSAmo_1000 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebo03021
]
SSAmo_1000 (rpoA)
03400 DNA repair and recombination proteins [BR:
ebo03400
]
SSAmo_1000 (rpoA)
Enzymes [BR:
ebo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSAmo_1000 (rpoA)
Transcription machinery [BR:
ebo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSAmo_1000 (rpoA)
DNA repair and recombination proteins [BR:
ebo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSAmo_1000 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BFI91109
LinkDB
All DBs
Position
complement(116273..117295)
Genome browser
AA seq
340 aa
AA seq
DB search
MSEFLKDFIKPTIKKLERFSNMSSKIILEPIEKGYSHTYANSIRRVLLSYIPGYAVTEIN
IDGILHEYSVIDGIKESVLEIILNLKSLAINIKNKNTIIVKIEKSGICKLTGKDIMKENK
NIEIINPNIIICNLINKNSNIKIMIKIEKGRGYFPINKRKKTPKKIGQIFLDVCFNPVKC
VSYSVKPYILKDHDDVESLNILIETNGAIDSEIAFKKAAQLLSEQYSIFMDTESFVRIYP
NSKMNKMNPMLLRSIEELELTVRSINCLKSESINYVGDLVQCTEIELLKTPNLGKKSLSE
IKKILNNHGLYLGMRIENWPPSNKYKIKKKNNFLKGKNET
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatttttaaaagattttataaaaccaacaattaaaaaacttgaaagattttca
aatatgagttcaaaaataattctagaaccaattgaaaaaggttatagtcatacttatgca
aattcaattagaagagttttattatcatatattcctggttatgcagtaacagaaattaat
attgatggaattttacatgaatacagtgtaattgatggtattaaagaaagtgtattagaa
attatattaaatttaaaatctttagcaataaatattaaaaataaaaatactataatagta
aaaattgaaaaatctggtatttgtaaattaactggtaaagatattatgaaagaaaataaa
aatattgaaattataaatcctaatattattatatgtaatttaataaataaaaattctaat
attaaaataatgattaaaatagaaaaaggtagaggatattttcctataaataaaagaaaa
aaaactcctaaaaaaattggacaaatttttttagatgtttgttttaatccagttaaatgt
gtttcatatagtgtaaaaccatatattttaaaagatcatgatgatgttgaaagtttaaat
attttaatagaaacaaacggtgcaattgattctgaaattgcgtttaaaaaagcagcacaa
cttttatcagaacaatattcaatttttatggatactgaaagttttgttagaatttatcct
aattctaaaatgaataaaatgaatcccatgttattaagaagtattgaagaattagaatta
actgtacgttctattaattgtttaaaatctgaatctataaattatgttggagatttagta
cagtgtactgaaattgaacttttaaaaacacctaatttaggtaaaaaatcgctttctgaa
attaaaaaaatattaaataatcatggtttatatttaggtatgagaattgaaaattggcca
ccatcaaataaatataaaattaaaaaaaaaaataattttttaaaaggaaaaaatgagaca
taa
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