Ectothiorhodospira sp. BSL-9: ECTOBSL9_0132
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Entry
ECTOBSL9_0132 CDS
T04374
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECTOBSL9_0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebs03019
]
ECTOBSL9_0132
03016 Transfer RNA biogenesis [BR:
ebs03016
]
ECTOBSL9_0132
Enzymes [BR:
ebs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECTOBSL9_0132
Messenger RNA biogenesis [BR:
ebs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECTOBSL9_0132
Transfer RNA biogenesis [BR:
ebs03016
]
Prokaryotic type
tRNA degradation factors
ECTOBSL9_0132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
OB_RRP5_4th
OB_PDCD11
KH-I_KHDC4-BBP
KH_SLS1_2
KH_2
KH_KhpA-B
S1_TP0910
Motif
Other DBs
NCBI-ProteinID:
ANB01101
LinkDB
All DBs
Position
complement(141343..143433)
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AA seq
696 aa
AA seq
DB search
MQSITKSFQYGQHTVTLETGEIARQATGAVMVDVAGTVVLVTAVGRKEAVPGRDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEKETLTCRLIDRPLRPLFPKGFTNEVQVVATVMSLN
PEVDPDIPALLGASAAVALSGMPFAGPIGAARVGYQDGEYLLNPDITPLKDSQLDLVVAG
TQNAVIMVESEATELSEEVMLGAVMYGHEQMQVAINAIRELAAEAGKPAWDWQPPEEDKD
LRTRVEEACLSDLTAAYQIAEKQERTARIKELRDEVKARLADGEEGSPEADEIKEVFHDI
EKRIVRNLVLDGKPRIDGRDTTTVRPIGVRVGVLPRTHGSALFTRGETQAIVTATLGTDR
DSQIIDAIEGERRERFMLHYNFPPYCTGETGMVGTPKRREIGHGRLAKRGVQGVMPADED
FPYVLRVVSEITESNGSSSMASVCGTSLALMDAGVPLKAPVAGIAMGLIKEQDRFAVLSD
ILGDEDHLGDMDFKVAGTEDGVTALQMDIKIDGITREIMEKALGQAREGRLHILKEMGKV
ITTPRGEMSAYAPRFITLRINPEKIRDVIGKGGATIRALTEETGATIDIDDSGVIKIASV
DKEAGEEAKRRIEEITADVEVGRVYEGRVAKIMDFGAFVTILPGRDGLVHISQISEERVE
SVSDKVKEGETVKVKVLEVDKQGRIRLSMKAVGQGE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtcaattaccaagtcgttccagtacggtcagcataccgtcaccctcgaaaccggc
gagatcgcccgtcaggccaccggcgccgtcatggtcgatgtggccggtaccgtggtgctg
gtgacggccgtaggccgcaaggaggccgtgccggggcgcgatttcttccccctgacggtc
aactatcaggaacggacttacgcagcagggcgtatccccggcggtttcttcaagcgcgag
gggcggccctccgagaaggaaaccctgacttgtcgcttgatcgaccgccccctgcggccc
ctgtttcccaagggcttcaccaatgaggtgcaggtggtggcgacggtcatgtcactgaac
ccggaagtggacccggatatcccggccttgctgggagcctccgctgcggtggccctgtcg
ggcatgccttttgccggccccatcggcgctgcccgggtgggctatcaggatggcgaatac
ctgctgaaccccgacatcaccccgctgaaggattcccagctggatctggtggtggccggt
acccaaaatgccgtcatcatggtggagtctgaggcgaccgagctctcggaagaggtcatg
ctgggcgccgtgatgtacggtcatgagcagatgcaggtggccatcaacgccattcgcgaa
ctggctgccgaagctggcaagcctgcctgggactggcagccgccggaagaggacaaggac
ctgcgcacccgcgtggaagaggcctgcctgtcggatctgaccgccgcctaccagattgcc
gaaaagcaggagcggaccgcgcgcatcaaggaattgcgtgatgaggtgaaggcccgtctt
gccgatggtgaggaaggctcccccgaggctgacgagatcaaggaagtcttccacgatatc
gagaagcgcatcgtgcgcaacctggttctggacggtaagccgcgcatcgacggtcgcgat
accaccaccgtgcgccccattggcgtgcgcgtgggcgtgttgcctcgtacccacggctcg
gcgctgttcacccggggtgaaacccaggccatcgtcactgcgaccctgggcacggatcgg
gattcccagatcatcgatgccatcgagggcgagcgccgcgagcgcttcatgctgcattac
aacttccctccctactgcaccggtgagaccggcatggtgggcacgcccaagcgccgcgag
attggtcatggccgtctggccaagcggggcgtgcagggtgtgatgccggcagacgaggac
ttcccctatgtgctgcgggtggtctcggagatcaccgaatccaacggctccagttccatg
gcctcggtctgcggcaccagcctggcgctgatggatgccggcgtgcccctgaaggccccg
gtggccggtatcgccatgggtttgatcaaggagcaggaccgcttcgcggtgctgtccgac
atcctcggggacgaggatcacctgggtgacatggacttcaaggtggctggtaccgaagac
ggtgtcactgcgttgcagatggatatcaagatcgacggcatcacccgcgagatcatggaa
aaggccctgggccaggcccgcgaaggccggctgcatatcctgaaggagatgggcaaggtc
attaccacgcctcgcggcgaaatgtccgcttatgcgccgcgtttcattaccctgcgcatc
aacccggagaagattcgggacgtgatcggcaagggtggcgccaccatccgtgccctcacc
gaggaaaccggtgccaccatcgatatcgacgattccggtgtgatcaagatcgcctcggtg
gacaaggaagccggcgaggaggccaagcgccgcatcgaggagatcaccgccgatgtggaa
gtgggccgggtctacgagggtcgcgttgccaagatcatggacttcggcgcctttgtcacc
atcctgcccggtcgtgatggcctggtgcatatctcccagatctccgaagagcgggtggag
agtgtgtcggacaaggtgaaggaaggcgagacggtcaaggtgaaggtgctggaagtggac
aagcagggccgtatccgcctgagcatgaaggcagtcggtcagggcgagtag
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