Ectothiorhodospira sp. BSL-9: ECTOBSL9_0134
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Entry
ECTOBSL9_0134 CDS
T04374
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebs03016
]
ECTOBSL9_0134
Enzymes [BR:
ebs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECTOBSL9_0134
Transfer RNA biogenesis [BR:
ebs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECTOBSL9_0134
Prokaryotic type
ECTOBSL9_0134
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ANB01103
LinkDB
All DBs
Position
complement(143874..144794)
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AA seq
306 aa
AA seq
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MSKPKIQRRDVHGLILLDKPQGYTSNQALQRVKYLFRARKAGHTGSLDPLATGLLPLCFG
EATKVSGFLLDADKRYHTVCRLGQKTLTGDAEGEVIDTRAIPALDDAQIESVLARFRGPI
EQIPPMYSALKHQGQRLYDLARKGQEVERPPRPVTIHDLRCLDYDDDTLTLDVVCSKGTY
IRTLVEDIGEVLGCGAHVIALRRIGLTPFEDPQMVTLEQIEALAEQGPQALDEALRPLDE
ALVHWPAVTLDADSAFYLGQGQAVFVPGLTHRGHLRLYGPGDRFLGVGRLLDDGRVAPKR
LIVQPT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccgaaaatccagcgccgtgacgtccacggcctgatcctgctggacaagcct
cagggatacacctccaaccaggccctgcagcgggtgaagtacctgtttcgggcccgcaag
gcaggccacaccggcagcctggatcccctggccaccggcctgttacccctgtgctttggt
gaggccaccaaggtctccgggtttctgctggatgccgacaagcgctatcacactgtctgc
cgcctggggcagaaaaccctgaccggcgatgccgagggggaggtgatcgacacccgggcg
atccccgctctggatgacgcgcagatcgagtcggtcctggcccggtttcgcgggcctatc
gagcagattccgcccatgtactcggcgctcaagcatcagggccagcggctgtacgatctg
gctcgcaaggggcaggaggtggaacgaccgccccgaccggtgaccatccatgacctgcgc
tgcctggattacgatgacgacactctgaccctggatgtcgtctgctccaagggcacctat
atccgcaccctggtggaagatattggcgaggtgctgggctgcggcgcccatgtgatcgcc
ctgcgacgcattggcctgacgcccttcgaagatccgcagatggtcaccctggagcagatc
gaggccctggcggagcagggcccgcaggccctggatgaggccctgaggcccctggatgaa
gccctggtccactggccggcggtcacactggatgccgatagtgccttttacctggggcag
gggcaggcggtgtttgtgcctggcctgacgcatcggggtcacctgcggctatacggcccc
ggggatcgcttcctgggggtgggtcggctgctggatgatggccgggtggcccccaagcgg
ctgattgtccagcccacctga
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