Ectothiorhodospira sp. BSL-9: ECTOBSL9_0888
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Entry
ECTOBSL9_0888 CDS
T04374
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebs03032
]
ECTOBSL9_0888
03400 DNA repair and recombination proteins [BR:
ebs03400
]
ECTOBSL9_0888
Enzymes [BR:
ebs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ECTOBSL9_0888
DNA replication proteins [BR:
ebs03032
]
Prokaryotic type
DNA Topoisomerases
ECTOBSL9_0888
DNA repair and recombination proteins [BR:
ebs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ECTOBSL9_0888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
TP_0677
Motif
Other DBs
NCBI-ProteinID:
ANB01716
LinkDB
All DBs
Position
896333..898912
Genome browser
AA seq
859 aa
AA seq
DB search
MSKHLVIVESPAKAKTIKKYLGNDFEVLASYGHVRDLVPKEGAVDTEDGFRMNYQVIERN
EKHVESIARALKKADSLILATDPDREGEAISWHLYELLNERGLLKDKDTQRVVFHEITQR
AVREAIEHPRGLSNDLINAQQARRALDYLVGFNLSPLLWKKIKRGLSAGRVQSPALRMIV
EREQEIEAFVSQEYWTVDAHVAKDAEGFTARLQVYAGKKLDQFDINNEADAQKARETLIA
SANGRLHVAKVEKKQRRRNPAAPFTTSTLQQEASRKLGFSASRTMRVAQQLYEGIDLGSG
PIGLITYMRTDSFTLSNDAIQEIRGLIEERYGKEKVPDSPRIYKTKSKNAQEAHEAIRPT
SVQRLPDEVKSHLSQDQARLYDLVWKRTVACQMIHATLDTVAADLQAGSADHVFRATGSS
VRDPGFMAVYREDQDDTKVESDERLLPELKEGEDIDLRDVQADQHFTEPPPRYSEASLVK
ALEEHGIGRPSTYASIISTLLQREYAELVNRRFIPSDIGRIVNTFLTQHFTQYVDYDFTA
RLEDELDEISRGEKEWVPVMERFWDQFHQQVKEKDASVTREEAVQAREIGTDPKSGRPVS
VRMGRYGPFVQIGTKDDEEKPRFAGLRPGQKMDSITMDEAMALFKLPRELGETPEGEPVL
VNIGRFGPYVKFGDRYASLKKEDDPYTIELPRALELVAEKKEIDANRFIKTFEEEGIQVL
NGRYGPYITNGAKNARIPKDQEPKDLTLEQCQELLAAAPEKKGRGRKAPAKKAATKKAAT
TKKTATKASATKKASDASPDTGKTATKAASKSTTKAKTASTSKKSTGSGTKAKASTGKGT
TRQSKKSAEDSTAGVSSGT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcacctggtcatcgtcgaatcgcccgccaaggccaagaccatcaagaagtac
ctcggaaacgatttcgaggtactggcttcctatggtcacgttcgtgacctggtgcccaag
gagggcgccgtggataccgaagatggtttccgcatgaattaccaggtgatcgagcgcaat
gaaaagcacgtggagagcatcgcccgggctctgaaaaaggctgacagcctgatcctggcc
actgaccccgaccgcgagggagaggccatttcctggcacctctacgagttgctgaatgaa
cggggtttgctcaaggacaaggacacccaacgggtggtattccacgagatcacccagcgg
gcggtgcgcgaggccattgagcacccccgcggcctgtccaacgacctgatcaatgcccag
caggcgcgccgcgccctggattacctggtgggcttcaatctctcaccgctgctgtggaag
aagatcaagcgtggcctctccgccggacgggtgcagagcccggccctgcgcatgatcgtg
gagcgggaacaggagatcgaggccttcgtcagccaggagtactggacggtggatgcccat
gtggccaaggacgccgaaggcttcacggcccggttgcaggtctatgccggcaagaagctg
gatcagttcgacatcaacaacgaagccgatgcccagaaggcccgcgagaccctgattgcg
tccgcgaacggtcgcctgcatgtggccaaggtggaaaagaagcagcggcgccgcaacccg
gccgcccccttcaccacctccaccctgcagcaggaggcctcgcgcaagctcggcttctcc
gccagccgcaccatgcgggtggctcagcagttgtatgagggcatcgacctgggcagcgga
cccatcggtctgatcacctacatgcggaccgactccttcaccctgtccaatgacgccatt
caggaaatccgggggctgatcgaggagcgctacggcaaggaaaaggtgccggacagcccg
cgcatctacaagaccaagtccaagaacgcccaggaggcccacgaggccatccgtcccacg
tcggtgcagcgcctgcccgacgaggtgaagtcgcatctctcccaggaccaggcccggctc
tacgacctggtgtggaaacgcaccgtggcctgccagatgatccatgccaccctggacacc
gtggcggccgatctgcaggcggggagcgccgatcacgtcttccgggccactggttcctcc
gtgcgcgacccgggcttcatggccgtgtaccgggaagaccaggacgacaccaaggtggaa
agcgacgaacgtctgctgccggagctcaaggaaggcgaggatatcgacctgcgggacgtg
caggcggaccagcacttcaccgaacccccgccgcgctactccgaggccagcctggtgaag
gccctggaagagcatggcattggacgcccctccacctatgcctccatcatcagcaccctg
ctgcagcgggaatatgccgagctggtgaaccggcggttcataccctcggacatcggccgc
atcgtcaataccttcctgacccagcatttcacgcagtacgtggactacgacttcaccgcc
aggctcgaggatgagctggatgagatctcccggggcgagaaggagtgggtgccggtgatg
gaacggttctgggaccagttccaccaacaggtcaaggagaaggacgcctcggtcacccgg
gaagaggccgtgcaggcgcgggagatcggcactgatcccaagtcgggccgacccgtctcg
gtgcgcatgggccgctacgggcccttcgtgcagatcggcaccaaggacgacgaggaaaag
ccccgtttcgcgggcctgcgccccggccagaagatggacagcatcaccatggacgaggcc
atggccctgttcaagctgccccgcgaactgggcgagaccccggaaggggagccggtgctg
gtgaacattggccgttttggcccctacgtgaagttcggggaccgctatgcctccctgaag
aaggaagacgacccctataccatcgaactgccccgggccctggaactggtggccgagaag
aaggaaatcgacgccaaccgcttcatcaagaccttcgaggaagaaggcatccaggtgctc
aatggccgctatggcccctacatcaccaacggcgccaagaatgcccgcatccccaaggat
caggaacccaaggacctgaccctggagcaatgccaggaactgctcgccgcggcgcctgag
aagaagggtcgcggtcgcaaggcccccgccaagaaggcggcgaccaagaaggcagccacc
accaagaaaaccgccaccaaggcgagcgccacgaaaaaggcctccgacgcatccccggac
actggcaagacggcaaccaaggccgccagcaagtccaccaccaaggccaagaccgccagc
accagcaagaagtccacgggcagcggcaccaaggccaaggcatccacggggaaagggacc
acccgtcaaagcaagaaatcggccgaggacagcacggccggcgtctccagcggcacctga
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