Ectothiorhodospira sp. BSL-9: ECTOBSL9_1124
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Entry
ECTOBSL9_1124 CDS
T04374
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03420
Nucleotide excision repair
ebs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECTOBSL9_1124 (uvrD)
03430 Mismatch repair
ECTOBSL9_1124 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebs03400
]
ECTOBSL9_1124 (uvrD)
Enzymes [BR:
ebs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECTOBSL9_1124 (uvrD)
DNA repair and recombination proteins [BR:
ebs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECTOBSL9_1124 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ECTOBSL9_1124 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
ANB01888
LinkDB
All DBs
Position
1176181..1178352
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AA seq
723 aa
AA seq
DB search
MDVSPLFDSLNEAQRQAVGSPSGPILVLAGAGSGKTRVLVHRIAWLIQAEGLSPHSILAV
TFTNKAASEMRGRLEGLLGMPPRGLWVGTFHGLSHRLLRAHWREARLPENFQILDSDDQY
RLVKRVLKALELDEAHWPPRKMQWFVNGRKDEGVRPAHMQDTGDPVNRQMIRFYTAYEQA
CQRAGVVDFAELMLRSLELLRDNPSLLEHYRSRFRHLLVDEFQDTNDIQYAWLRLLAGEK
TPVFAVGDDDQSIYGWRGARIEHIQKFTRDFPGALTVRLEQNYRSTATILGAANTLIRQN
GSRLGKELWTDGLQGEPIKLYGAFNEYDEARFVADQLRGWREGGGACREVAILYRSNAQS
RVLEETLIQAGIPYRVYGGLRFFERAEIKDALCYMRLVASRDDDMALERVINQPTRGLGE
RTVALIREQAREQGVSLWDAAGRLLEQGALAARAGNALRGFRALVDDMAAACATLDLHEQ
VEHVVAHSGLKGHYEAEKGEKAQARVDNLEELVSAARGFVHDPERHEDMSPLTAFLSHAA
LEAGEGEADAWEDCVQLMTLHSAKGLEFPLVFLVGMEEGLFPHRMSLEEPGRLEEERRLA
YVGITRACRRLVLTYAESRRLHGRESYNAPSRFIAELPEDLLEDVRPRATLRRPVVEPVR
AKRVKEPPAQGLALGARVRHRKFGEGVILDSEGQGSSARVQVRFDGEGTKWLVVGYAKLE
PVS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcccctttgtttgattccctgaacgaggcccaacgccaagcggtgggcagc
ccctctggtcctatcctggtgctggccggtgccggcagtggcaagacccgcgtgctggtg
catcgcatcgcctggttgattcaggcggagggcctgtctccccacagcattctggcggtc
accttcaccaacaaggcggccagcgagatgcgtgggcggctggaaggcctgctgggcatg
ccgccccgggggctttgggtaggcacctttcacggcctgtctcaccgcctgttgcgggcc
cattggcgcgaggccaggctgccggagaacttccagatcctggactcggacgatcagtat
cgcttggtgaagcgcgtgctcaaggccctggagctggacgaggcccactggccgccgcgc
aagatgcagtggttcgtcaatggtcgcaaggatgagggggtgcgcccggcgcacatgcag
gacaccggcgatccggtgaaccggcagatgatccgcttctacacggcctacgagcaggcc
tgtcagcgtgccggtgtggtggattttgccgagctcatgctgcgcagcctggagttgctg
cgcgacaacccgagcttgctggagcattaccgcagtcgcttccgccatctgctggtggat
gagttccaggataccaacgacatccagtatgcctggctgcgtctgctggccggtgagaaa
acgccggtgttcgccgtgggtgacgatgatcagtccatctatggctggcgaggtgcccgc
atcgagcacatccagaagttcacgcgggacttccccggcgccctgacggtgcgtctggaa
cagaattaccgctccaccgccaccatcctgggggcggccaataccctgatccgtcagaac
ggctcgcgcctgggcaaggagttgtggaccgacgggttgcagggggagccgatcaagctc
tacggtgccttcaatgaatacgatgaggcccggttcgtggccgaccagctccgcggctgg
cgggaggggggtggggcctgtcgtgaggtggccattctctatcgctccaacgcccagtcg
cgggtgctggaggaaaccctgatccaggcgggcatcccctaccgggtatacggggggctg
cggttcttcgagcgggccgagatcaaggatgccctgtgctacatgcgcctggtggcgtcg
cgtgacgatgacatggccctggaacgggtgatcaatcaacccacgcggggcctgggggag
cgcaccgtggcgttgatccgtgaacaggcccgggagcagggggtgtctttgtgggatgcc
gctggcaggctgctggagcagggcgccctggcggcccgggccggtaatgccctgaggggg
ttcagggcactggtggacgacatggctgctgcctgtgcgactctggatctgcatgagcag
gtggagcatgtggtcgcgcattcgggtctcaagggtcattacgaggcagaaaaaggggag
aaggctcaggcgcgggtggataacctggaggagctggtgagcgcggcccgggggtttgtc
cacgatccggagcggcatgaggacatgagtccgctgacggcgtttttgtcccacgcggcc
ctggaggcgggcgagggtgaggcggacgcctgggaggattgtgttcagttgatgaccctg
cattcggccaagggtctggagtttccgctggtgttcctggtggggatggaggagggcctg
tttccgcaccggatgtcgctggaggagccggggcggttggaggaggagcggcgtctggcc
tatgtggggatcacccgggcctgtcgtcggctggtgctgacgtatgcggagagtcggcgt
ctgcatggtcgggagagttataacgcgccttcgcggttcatcgcggagttgccggaggat
ctgctggaggatgtgcgcccgcgggcgacgctgcggcgaccggtggtggagccggtgcga
gccaagcgtgtgaaggagccgccggcacaggggctggctctgggcgcgcgggtgcggcac
aggaagtttggtgagggtgtgatcctggattccgaggggcagggttcttcggcgcgagtg
caggtgcggtttgatggtgagggcaccaagtggctggtggtgggatatgcgaagctggag
cctgtgtcataa
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