Ectothiorhodospira sp. BSL-9: ECTOBSL9_1405
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Entry
ECTOBSL9_1405 CDS
T04374
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ECTOBSL9_1405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebs03021
]
ECTOBSL9_1405
Transcription machinery [BR:
ebs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ECTOBSL9_1405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF885
DUF5069
Motif
Other DBs
NCBI-ProteinID:
ANB02111
UniProt:
A0A167AK64
LinkDB
All DBs
Position
complement(1486050..1487921)
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AA seq
623 aa
AA seq
DB search
MNHEEQQSRLKELIAKGKEQGFLTYAEVNDHLPDTIVDPEQIEDIIAMINDMGITVHEQA
PDTDSLILSDNSVSTDEDAAEEAAAALASVDGEFGRTTDPVRMYMREMGTVELLTREGEI
KIAKRIEEGLSQVLFALAHYPKSIASLLSEYGRVEAEEIKLTDIIVSFMDPHADEIASVA
PPREESPAAPAAAVASDDSDGDSDDGDSDDSDDDAAPEDTGPDPEEARARFTQLEAMYER
AMECAAQGKSEEYAQAREEMARYFMEFKLVPRLVDQLTADLHDTVSRIRGQERMILRTCV
DQCNMPRKEFISTFPDNETNLKWLDGALKGKAARYKTQLAEHRDDILKAQNRLVDIQEES
SLTIGEIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIG
LMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQML
QEMGREATPEELSQRMEMPEDKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDVNVQSP
IDSATRESLSETTREVLASLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIE
AKALRKLRHPSRSEMLRSFLDLE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaagaacagcaatcgcgcctcaaggagctcatcgccaagggcaaggaacag
ggcttcctgacctatgcggaggtgaacgaccacctcccggacaccatcgtcgatccggag
cagatcgaagacatcatcgccatgatcaacgacatggggatcactgtccacgagcaggca
ccggataccgacagcctgatcctgtccgacaactccgtgtccaccgacgaagatgccgcc
gaggaagccgccgccgcgctggcctccgtggacggggaattcgggcgcaccaccgacccg
gtgcgcatgtacatgcgcgagatgggcacggtggagctgctcacccgcgaaggcgagatc
aagatcgccaagcgcatcgaggaaggcctctcgcaggtccttttcgccctggctcactac
cccaagtccatcgcctcgctgctgtcggaatacggccgcgttgaggccgaggagatcaag
ctcaccgacatcattgtgagcttcatggacccgcacgccgacgagatcgcctccgtggcc
ccgccccgtgaggaatccccggctgccccggctgccgccgtggcctcggacgacagcgac
ggtgacagcgacgacggcgactcggacgattccgacgacgacgccgccccggaagacacc
ggcccggatccagaagaggcccgcgcccgcttcacccagctggaggccatgtacgagcgc
gccatggaatgcgctgcccagggcaagagcgaggaatacgcccaggcccgggaagagatg
gcccgctacttcatggaattcaagctggtgccccgcctggtggaccagctcactgccgac
ctgcacgacacggtgtcccgcatccgcggccaggagcgcatgatcctgcgtacctgcgtg
gatcagtgcaacatgccccgcaaggagttcatctccaccttcccggacaacgagaccaac
ctgaagtggctcgatggcgctctcaagggcaaggccgcccgctacaagacgcagctcgcc
gaacaccgggatgacatcctcaaggcccagaaccgcctggtggacatccaggaagagtct
tctctcaccattggcgagatcaaggacatcaaccgccgcatgtccatcggtgaggccaag
gcccgccgcgccaagaaggagatggtggaggccaacctgcgcctggtgatctccatcgcc
aagaaatacaccaaccgcggcctgcagttcctggacctgatccaggagggcaacatcggc
ctgatgaaggcagtggacaagttcgaataccgccgtggttacaagttctccacctatgct
acctggtggattcgccaggccatcacccggtccatcgccgaccaggcacgcaccatccgc
attccggtgcacatgatcgagaccatcaacaagctcaaccgcatcagtcggcagatgctt
caggagatgggtcgcgaggccaccccggaagaactttcccagcgcatggaaatgcccgag
gacaaggtgcgcaaggtactcaagatcgccaaggagcccatctccatggaaacccccatt
ggcgacgacgaggactcgcacctgggtgatttcatcgaggacgtgaacgttcagtcgccc
atcgactccgccacccgggaaagcctgtcggagaccacccgcgaggtgctggccagcctc
accccgcgcgaggccaaggtgctgcggatgcgctttggcatcgacatgaacacggaccac
acgctggaagaggtcggcaagcagttcgacgtcacccgcgagcgcatccgtcagatcgag
gccaaggccctgcgcaagctgcgccacccctcccgctcggagatgctgcgcagcttcctc
gacctggagtaa
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