| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta
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| KO |
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| Organism |
ebs Ectothiorhodospira sp. BSL-9
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ebs00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECTOBSL9_1605 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ebs03021]
ECTOBSL9_1605 (rpoB)
03400 DNA repair and recombination proteins [BR:ebs03400]
ECTOBSL9_1605 (rpoB)
Enzymes [BR:ebs01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECTOBSL9_1605 (rpoB)
Transcription machinery [BR:ebs03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECTOBSL9_1605 (rpoB)
DNA repair and recombination proteins [BR:ebs03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECTOBSL9_1605 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1701706..1705788
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| AA seq |
1360 aa
MAYSYTEKKRIRKDFGKRPQILEVPYLLATQIDSYRQFLQMRDPEAGREEVGLHAAFKSV
FPIVSYSGSVELEYVSYRLGDPVFDVKECQLRGMNYAAPLRVLLRLVIYDKDAPAGSRVV
KDIKEQEVYMGELPLMTENGTFVVNGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLFNA
RVIPYRGSWLDFEFDPKDSIYVRIDRRRKLPATVLLRALGLETEEILATFFETTDFRVLT
DGFEMALVPARLRGETAAFDIHLGDELLVESGRRITARHVRKMEEAGLNSLQVPADSLIG
KILAHAVVDEDSGEVIANANEELTADLLEKVRRSGMKSFRTLYTNELDHGPYISSTLNID
TTRSQLEAQVEIYRMMRPGEPPTKEAAETLFNNLFFSEDRYDLSPVGRMKFNRRVGREQE
TGPGVLNNDDILDVLKVLIDIRNGNGHVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERA
VKERLSVAESEGLMPQELINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARTNRFGFLETPYRRV
VDGKVSEEILYLSAIEEGNYVIAQANVALDEEGRLVDELVSCRYQNEFTMSTPDKIQCVD
ISPKQIVSVAAALIPFLEHDDANRALMGSNMQRQAVPCLRAETPVVGTGIERTVAIDSGS
SIVARRGGVVDSVDAARVVVRVNDDETEAGEPGVDIYNFTKYTRSNQNTCINQSPLVRVG
DTIARGDVLADGSSTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVEEDRFTSIHIE
ELTCVARDTKLGPEEISADIPNVSESLLSKLDESGIVYVGAEVNPGDILVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVASGIDGTVIDVRVFTRDGVEKDKRALQIEEAALE
SVRKDLKDQLRIYEDDIYDRVEKLLNGKLAAGGPGGLKDGVKVTRSYLGELPREKWFEIR
MRSEEVNEQLELMADALKAQHDAFEKRFKEQKDKLTAGDDLAPGVLKMVKVYVAVKRRMQ
PGDKMAGRHGNKGVVSMIVPTEDMPFTEDGTPMDIVLNPLGVPSRMNVGQVLETHLGWAA
KGLGKKIGHMIEAKAKVDELRQFLDQMYNHDPDNRKEDLSLLSDEEILELAGNLKNGVPM
ATPVFDGAHEHEIKAMLKLADLPESGQATLFDGRTGESFDRPVTVGYMHILKLNHLVDDK
MHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLQEMLTVKSDDVQGRN
KMYKNIVDGDHRMEANIPESFNVLMKEIRSLAINIELEQD |
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| NT seq |
4083 nt +upstreamnt +downstreamnt
atggcttatagctacaccgagaaaaagcgaatccgcaaggacttcggcaaacggccccag
atccttgaggtcccctatctgttggccacgcagattgattcctatcggcagttcctccag
atgcgcgaccccgaggccgggcgcgaggaggtaggtctgcacgccgctttcaagtcggtt
tttccgattgtgagctattccggctccgtggagctggagtatgtcagctaccggttgggc
gaccccgtgttcgacgtcaaggaatgtcagctgcggggcatgaattatgctgcgcccctg
cgcgtgctgctgcgcctggtgatctatgacaaggatgccccagcgggctcccgtgtcgtc
aaggacatcaaggagcaggaagtctacatgggtgaattgccgctcatgaccgagaacggc
accttcgtggtgaacggtaccgagcgcgtgatcgtgtctcagttgcaccgttcccccggt
gtgttctttgaccatgacaagggcaagacccacagttccggcaagctcctgttcaatgcc
cgggtgatcccgtatcgcgggtcctggctggacttcgagtttgaccccaaggattccatt
tacgtgcgcatcgaccgccgccgcaagctaccggctacggtgctgctgcgcgcgttgggt
ctggagacggaggagatcctcgccaccttcttcgagaccaccgatttccgcgtgctcacc
gacggcttcgagatggcgctggtgcccgcgcgtctgcgtggcgaaaccgctgcgttcgat
atccatctgggtgatgagctgctggtggagtctggccgtcgcatcactgcccgccatgtg
cgcaagatggaggaggccggcctcaactccctgcaggtgccggccgattccctgattggc
aagatcctcgcccatgcggtggtggatgaggacagcggcgaggtgatcgccaatgccaac
gaggaactcaccgccgatctgctggagaaggtgcgccgctccggcatgaagagcttccgc
acgctttacaccaacgagctggatcacggcccgtacatctccagtacgctgaacatcgat
accacccgctcccagctggaggcgcaggtggaaatctatcgcatgatgcgccccggcgag
ccgcccaccaaggaagcggccgagaccctgttcaataatctgttcttcagcgaggatcgt
tacgacctctcgcccgtgggccgcatgaagttcaaccgccgtgtgggccgggagcaagag
accgggccgggtgtgctgaacaacgatgacatcctggatgtgctcaaggtgctcatcgat
atccgcaacggcaacggccatgtggacgacatcgaccacctgggtaaccgtcgtgtgcgc
agcgtgggtgagatggcggagaacgtcttccgcgtcggcctggtgcgcgtggagcgggcc
gtgaaggagcgcctgagcgtggccgagagcgagggcctgatgccccaggaactcatcaac
gccaagccggtggcggcggcggtgaaggagttcttcggttccagtcagctgtcccagttc
atggaccagaacaacccgctctccgaggtgactcacaagcgccgtatctcggccctgggg
cctggtggcctcacccgtgaacgcgccggcttcgaggtgcgcgacgtgcacccgacccac
tatggtcgggtctgccccatcgaaacgccggaaggtccgaacatcggcctgatcaactcc
ctggccgtgtatgcccgcaccaaccgcttcgggttcctggagaccccgtatcggcgcgtg
gtggacggcaaggtgagtgaagagatcctgtacctgtcggccatcgaagaaggcaactat
gtgatcgcccaggccaacgtggccctggacgaggaaggtcgcctggtggacgagctggtg
tcctgccgttatcagaacgagttcaccatgtcgacgccggacaagatccagtgcgtggac
atctcgcccaagcagatcgtttccgtggccgccgcgctgattccgttcctggagcacgac
gatgccaaccgcgccctcatgggctcgaacatgcagcgccaggccgtgccctgcctgcgt
gccgagaccccggtggtgggtaccggcatcgagcgcacggtggccatcgactccggttcc
tccatcgtcgcccgtcgtggcggtgtggtggactcggtggatgcggcccgtgtggtggtg
cgcgtcaacgatgacgagaccgaggctggcgaaccgggtgtggatatctacaacttcacc
aagtacacccgttccaaccagaacacctgcatcaaccagagtccgctggtgcgcgtgggc
gacaccatcgcccgcggcgacgtgctggccgacggatcctccacggatttgggggagctg
gccctgggtcagaacatgctggtggccttcatgccctggaacggctacaacttcgaggac
tccatcctcatctccgagcgcgtggtggaagaggatcgctttacctccatccacatcgag
gagctgacctgcgtggcccgggacaccaagctggggccggaggagatcagcgccgatatt
cccaacgtgtcggagagcctgctgtccaagctggatgagtcgggcattgtctacgtgggc
gccgaggtgaatccgggcgatatcctggtgggcaaggtcacgcccaagggcgaaacccag
ctcacccccgaggagaagctgctgagagccatctttggtgaaaaggcttcggacgtgaag
gacaccagtctgcgcgtggcgtccggtattgatggcacggtcatcgatgtgcgcgtcttc
acccgtgatggtgtggagaaggacaagcgggccctgcagattgaagaggctgcgctggag
tcggtgcgcaaggacctgaaggaccagttgcgcatctacgaggacgacatctacgatcgc
gtggagaaactgctcaacggcaagctggccgcgggtggtcctggtggtctgaaggatggc
gtcaaggtgacccgttcctacctgggggaactgccccgggagaagtggttcgagatccgc
atgcgcagcgaagaggtgaacgagcagctggagctgatggccgatgccctcaaggcccag
cacgatgccttcgagaagcgcttcaaggagcagaaggacaagctcaccgccggtgacgat
ctggcaccgggtgtgctgaagatggtcaaggtgtatgtggccgtgaagcgtcgcatgcag
ccgggtgacaagatggcgggtcgtcacggtaacaagggtgtggtctccatgatcgtgccc
accgaggacatgcccttcaccgaggatggcacccccatggatatcgtcctcaaccccctg
ggcgtgccgtcgcgcatgaacgtgggtcaggtgctggaaacccacctgggctgggcggcc
aagggtctgggcaagaagatcggtcacatgatcgaggccaaagcgaaggtggatgagctg
cgtcagttcctggatcagatgtacaaccacgatccggacaaccgcaaggaagacctgtcc
ctgctgagcgacgaggagatcctggagctggccggcaacctgaagaacggtgtgcccatg
gccacgccggtgttcgacggtgcccatgagcatgagatcaaggccatgctcaagctggcg
gatctgcccgagtcgggacaggcaacgctgttcgatggccgcactggcgagtcctttgat
cgcccggtgaccgtgggttacatgcacatcctcaagctcaaccacctggtggatgacaag
atgcatgcccgttccacgggcccctatagcctggtgacccagcagccgctgggtggtaag
gcgcagtttggtggccagcgctttggtgagatggaggtctgggcgctgcaggcctatggt
gccgcgtacaccttgcaggaaatgctcactgtgaagtccgacgatgttcagggacgcaac
aagatgtacaagaacattgtcgatggcgatcaccggatggaggcgaacattcctgagtcc
ttcaatgtgctcatgaaggagatccgttcgctggccatcaatatcgaactggagcaggac
tga |
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