Ectothiorhodospira sp. BSL-9: ECTOBSL9_1834
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Entry
ECTOBSL9_1834 CDS
T04374
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECTOBSL9_1834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebs03019
]
ECTOBSL9_1834
Enzymes [BR:
ebs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECTOBSL9_1834
Messenger RNA biogenesis [BR:
ebs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECTOBSL9_1834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANB02438
UniProt:
A0A161HFG2
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All DBs
Position
complement(1941152..1942450)
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AA seq
432 aa
AA seq
DB search
MTDQHVSDTHFASFDLPDPVRQGLQDAGFTHCTPIQGLALPPALEGKDVAGQAQTGTGKT
AAFLITVFTHLLRHPAPEQRRPNQVRALILAPTRELAIQIHKDAMVLGSHTGLTLGLAYG
GTDYEKQRKQLSDGVDILIGTPGRIIDYFKQKVFDLRQAQTLVLDEADRMFDLGFIKDVR
FLLRRMPPPTERQSMLFSATLSWRVMELAYEHMNNPAKVQTQDEQVTAERVSQCVYYPAN
DQKIPLLLGLMQKLGPERSMVFVNTKHWAEKVTAWLEGNGIRVALLSGDVPQRKRQSLLA
RFEQSEYQVLVATDVAARGLHIPDVSHVFNFDLPQSGEDYVHRIGRTGRAGAEGDAISFA
CEDFAFHLPEIEEYIGFKIASEMTDPSVLATDLAPPAKRKRESAGPPRGRSGKRPGAPSG
GNKPPRKPRPTT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcaacatgtttctgatacccacttcgcaagtttcgacctcccggacccggtg
cgccagggcctgcaggatgccggcttcacccactgcacccccattcagggtctggccctg
cctccggcactggagggcaaggacgtggccggacaggcccagacgggcaccggcaagacg
gcggccttcctgatcaccgtgttcacccacctgcttcgacacccggccccggagcagcgc
cgacccaaccaggtgcgggcactgatcctggcccccacccgcgagctggccatccagatc
cacaaggacgccatggtgctcggcagccataccgggctcacccttggactggcctacggc
ggcaccgattacgagaagcagcgcaagcaactctcggatggggtggacatcctgatcggc
accccaggacgtatcattgattatttcaagcaaaaggtcttcgacctgcgccaggcgcag
accctggtactggacgaggccgaccgcatgttcgacctgggcttcatcaaggacgtgcgc
tttctgctcaggcgcatgcccccgcccaccgaacggcagtccatgctgttctctgccacc
ctgtcctggcgggtgatggaactggcctacgagcacatgaacaacccggccaaggtgcaa
acccaggatgaacaggtgaccgccgaacgggtaagtcagtgcgtgtattacccggccaat
gaccagaagatcccgttactgctgggcctgatgcagaaactggggccggagcgatccatg
gtgttcgtgaacaccaagcactgggccgaaaaggtcactgcctggctggaaggcaacggc
atccgcgtggccctgctctcgggcgacgtgccacagcgcaagcgccagagcctgctggcc
aggtttgagcaaagcgaatatcaggtgctggtggccaccgacgtggcggcccgcggcctg
cacatacccgatgtgtcccatgtgttcaattttgatctgccccagtctggcgaggactat
gtccaccgcatcggtcgcaccggccgggcgggtgcggagggggacgccatcagctttgcc
tgcgaggacttcgccttccacctgccggagatcgaggaatacatcggcttcaagatcgcc
tcggagatgaccgacccctcggtcctggccaccgacctggcacctccggccaagcgcaag
agggagtccgccggcccaccccgtggccgctcaggcaagcgaccgggcgcaccttccggc
ggcaacaagcctcctcgcaaaccacggcccaccacatga
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