Ectothiorhodospira sp. BSL-9: ECTOBSL9_2261
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Entry
ECTOBSL9_2261 CDS
T04374
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECTOBSL9_2261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebs03400
]
ECTOBSL9_2261
Enzymes [BR:
ebs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ECTOBSL9_2261
DNA repair and recombination proteins [BR:
ebs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECTOBSL9_2261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
AAA_28
T2SSE
PhoH
AAA_5
NTPase_1
nSTAND3
TraI_hel_assoc_N
Mg_chelatase
UvrD_C
AAA_16
AAA_25
AAA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ANB02784
UniProt:
A0A161HSN1
LinkDB
All DBs
Position
complement(2416449..2418554)
Genome browser
AA seq
701 aa
AA seq
DB search
MTGHPPDPTLALLGEWAVAGAIRPLDLSLTRFIHTQAPEQDPAVLLAIALTSERNGHGHV
CLDLAQALEHPETLLTRLRDDQPLAQGIRLTLARELGKLTLTDWVGRLRASPAISLAEEA
RDPQEPRPLVLDGEPERPLLYLRRYWAYEQRIAEGIQSRLQQPLPIPETPLARLLDTLFQ
PAPGQAPPPGPDWQRLACALAARSGFFILTGGPGTGKTTTVVRLLALLQRLAAVQGLPAL
RIELAAPTGKAAARLNESINTQVKALPPAGPMDTDVGPIPTRVKTLHRLLGPRPDSRRFR
HHPGNPLAADVVVVDEASMVDVEMMVHLLDALRPEARLILLGDKDQLASVEAGAVLGDLC
QRAHRAHYTPDTRDWLARVSDQDLPDAYVDAEGGALDQAVAMLRTSHRFSDAGGIGALAA
RVNDPEQDPRDADAALVAVREVLERSAAEPDGSLGRVEAIHLEDEADPRFDRLVREGYSG
YLQQLEQAPHDPDDPALIDAWAHDTLKAQRDFQLLTALRDGDWGVSGLNTRIIQVLRTAR
LLPGEAEAGAPGQRQWFAGRPVLITRNDYTLNLMNGDIGITLPVPVRQGGEVRTVLRVAF
PGEADQVRWVLPSRLQAVETVFAMTVHKSQGSEFEHTALVLPDAPNPVLTRELLYTAITR
SRSRFTLLYSQASVLGEAITRRVNRDSGLSGRLIRRHPPAP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacagggcaccctcccgatcccaccctggccctgctgggcgaatgggcggttgccggg
gccattcgtcccctggacctgtcgctgacccgcttcatccacacccaggcaccggagcag
gaccccgccgtgctgctggccatcgcactgaccagcgaacgcaatggtcatggccatgtg
tgtctggatctggctcaggccctggaacatccggagaccctgctcacccgtctgcgggat
gaccagcccctggcccagggcattcgcctcaccctggcgcgggaactggggaagctcacc
ctgacggactgggtggggcgcctgcgggccagcccggccatcagcctggcggaagaggcg
cgcgacccgcaggagccgcgccccctggtgctggatggcgaaccggaacgtcccctgctc
tatctgcgccgctactgggcctatgagcagcgcatcgccgaagggatacaaagccgcctg
cagcaaccgctgcccattcccgaaacgcccctggcccgcttgctggacaccctgttccaa
ccggcgcccggtcaggcgccacccccagggcccgactggcagcgcctggcctgtgccctg
gcggctcgcagcgggttcttcatcctcaccgggggaccgggcaccggcaagaccaccacc
gtggtgcgtctgctggccctgttgcagcgcctggccgccgtgcagggcctgcccgccctg
cgcatcgagctggccgcccccaccggcaaggccgccgcgcgtctgaatgaatccatcaac
acccaggtcaaggccctgccgcccgccgggcccatggacaccgatgtgggacccatcccc
acccgcgtgaagaccctgcaccgactgctgggaccccgtcccgacagtcggcgtttccgg
catcacccgggcaaccccctggccgccgatgtggtggtggtggacgaggcctccatggtg
gacgtggagatgatggtgcacctgctggacgccctgcgccccgaggcccggctgatcctg
ctgggggacaaggatcagctggcctcggtggaggccggcgcggtgcttggggacctgtgc
cagcgtgcccatcgggcccattacaccccggacacccgggactggctggcccgggtgagt
gatcaggacctgccggatgcgtacgtcgatgccgagggcggcgccctggaccaggcggtg
gccatgctgcgcaccagtcaccgcttcagcgatgcggggggcattggcgccctggcggcc
cgggtgaatgacccggagcaggacccgcgggatgccgacgccgccctggtggcggtaaga
gaagtccttgaacgatcggctgcagaacccgatggttccttgggccgtgtggaggccatc
cacctggaggatgaggccgatccccgctttgatcgactggtgcgggagggctattcggga
tacctgcaacaactggaacaggccccccatgatcccgatgatccggccctgatcgatgcc
tgggcccacgacaccctgaaggcccagcgggactttcagctgctcacggccctgcgggat
ggggactggggggtgagcggcctcaacacccgcatcatccaggtgctgcgcaccgcccgg
ctgctgcccggcgaggcggaggcgggtgcccccggccagcgtcagtggtttgccgggcga
ccggtgctgatcacccgcaacgactacaccctgaacctgatgaatggcgacatcggcatc
accctgcccgtgccggtgcgccaggggggcgaggtgcgcacggtactgcgggtggccttc
ccgggcgaggccgatcaggtacgctgggtactgcccagccgcctgcaggcggtggagacg
gtattcgccatgacggtgcacaagtcccagggctcggagttcgagcacacggccctggtc
ctgcccgatgcccccaacccggtgctcacccgggagctgctctacaccgccatcacccgc
tcacgcagccggttcaccctgctctacagccaggcctcggtgctgggcgaggccatcacc
cgccgggtgaaccgggacagcggtctgagtgggcgccttatcagaaggcatcccccggca
ccctga
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