Ectothiorhodospira sp. BSL-9: ECTOBSL9_2580
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Entry
ECTOBSL9_2580 CDS
T04374
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECTOBSL9_2580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebs03400
]
ECTOBSL9_2580
DNA repair and recombination proteins [BR:
ebs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECTOBSL9_2580
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECTOBSL9_2580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
UB2H
AAA_22
DUF5610
Kinesin
AIP3
Motif
Other DBs
NCBI-ProteinID:
ANB03029
LinkDB
All DBs
Position
2764743..2766761
Genome browser
AA seq
672 aa
AA seq
DB search
MDQPFHLSTRFDPAGDQPAAIESLLDGLDSGLAHQTLLGVTGSGKTFTIANVIQKSQRPT
IIMAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINDHIE
QMRLSATRALLERRDAIIVASVSAIYGLGDPRAYLQMVMHLKRGDVIDQREMLRRLAELQ
YTRNDLELKRGTYRVRGEVIDIHPAESEREAVRVELFDEEIEQLSYFDPLTGEVLRRVPR
LTIYPKTHYATPRETLLEAVEQIKVELRERLEALRQSDQLVEAQRLEQRTRFDLEMMLEL
GYCSGVENYSRYLSGRKAGEPPPCFLDYLPKDALLVIDESHVTVPQLGAMYKGDRSRKET
LVQYGFRLPSAMDNRPLRFEEFEALAPQAIYVSATPGPYEQKMAGQVVEQVVRPTGLVDP
EVEVRPATTQVDDVLSEIRLRTEVNERVLITTLTKRMAEDLTEYLSEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAVLDADKEGFLRSDRSLIQTIGR
AARNLNGRAILYADRVTGSMQRAMDETERRREKQVAHNQEHGITPKGVEKRIADIMEGAY
AGGSMAAPKRYARVAEQEAEYGRMSPKDTAKEISRLESQMFEHARNLEFEEAARLRDRIE
KLRDGMLGVVEG
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacctttccacctttccacccgctttgacccggcgggagaccagcccgccgcc
attgaaagcctgctggatggcctggactcgggcctggcccatcaaaccctgctgggagtg
accggctcgggcaagaccttcacgattgccaacgtgatccagaagtcgcagcggcccacc
atcatcatggcgcccaacaagaccctggcggcccagctctatggcgagatgaaggagttc
ttcccggagaacgccgtggaatacttcgtctcctattacgactattaccagcccgaggcc
tatgtgccgtcgtcggacaccttcatcgagaaggattcctccatcaacgaccacatcgaa
cagatgcgcctgtcggccacccgggccctgctggagcgtcgcgatgccatcatcgtggcc
agcgtttcggccatttatggtctgggggacccccgggcctatctgcagatggtgatgcac
ctcaaacggggggatgtgatcgatcagcgggagatgctgcgccggctggcggaattgcag
tacacccgcaacgatctggagctcaagcgcggcacctaccgggtgcgcggcgaggtgatc
gacatccacccggcggagtccgaacgcgaggccgtgcgggttgagttgttcgacgaggag
atagagcaactctcctatttcgacccgctcaccggggaggtgctgcgccgggtgccgcgc
ttgaccatctatcccaagacccactacgccacgccccgtgagaccctgctcgaagccgtg
gagcagatcaaggtggagctccgggagcgcctggaggccttgcgccagtcggatcagttg
gtggaggcccagcgcctggagcagcgcacccgctttgatctggagatgatgctggagctg
ggctactgctccggggtcgagaactattcccgctatctttcgggccgcaaggcgggggaa
ccgccgccgtgttttctggattacctgcccaaggatgccttgctggtgatcgatgagagc
catgtcacggtcccacagctgggcgccatgtataaaggcgaccgctcccgcaaggagacc
ctggtgcagtatggcttccgcctgccttcggccatggacaatcgtcccctgcgtttcgag
gaattcgaggccctggcaccccaggccatttatgtttccgccacgcccgggccctatgag
cagaagatggcggggcaggtggtggagcaggtggtgcgtcccaccggactggtggacccg
gaggtggaggtgcgcccggcgaccacgcaggtggatgatgtgctctcggaaatccggctg
cgcacggaggtcaatgagcgggtgctgatcaccacgctcaccaagcgcatggccgaggat
ctcaccgaatacctgagtgaacacggcattcgcgtgcgttatctgcattccgacatcgat
accgtggagcgtgtggagatcatccgtgatctgcgcctggggaaattcgatgtcctggtg
ggtatcaacctgttgcgtgagggcctggacatgcccgaggtgtccctggtggccgtgctg
gatgcggacaaggaaggcttcctgcggtccgatcgctcgttgatccagaccatcggccgc
gcggcccgaaacctgaacggcagggcgattctttacgccgacagggtgacgggctccatg
cagcgggccatggacgagactgaacgtcgccgcgagaagcaggtggcccataatcaggaa
cacggcatcacccccaagggggtggagaagcgtatcgccgacatcatggagggtgcctat
gccggtggctccatggccgcacccaagcgttacgccagggtggcggagcaggaggcggaa
tacggacgcatgtcacccaaggatactgccaaggagatcagtcgtttggagagccagatg
ttcgaacacgcccgcaacctggaatttgaggaggcggcccgattgcgggaccggatcgag
aagctcagggacggcatgctgggcgtggtggagggctaa
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integrated database retrieval system
