Ectothiorhodospira sp. BSL-9: ECTOBSL9_2954
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Entry
ECTOBSL9_2954 CDS
T04374
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ebs
Ectothiorhodospira sp. BSL-9
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebs03032
]
ECTOBSL9_2954
03036 Chromosome and associated proteins [BR:
ebs03036
]
ECTOBSL9_2954
03400 DNA repair and recombination proteins [BR:
ebs03400
]
ECTOBSL9_2954
DNA replication proteins [BR:
ebs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ECTOBSL9_2954
Chromosome and associated proteins [BR:
ebs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ECTOBSL9_2954
DNA repair and recombination proteins [BR:
ebs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ECTOBSL9_2954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
CATASP
Motif
Other DBs
NCBI-ProteinID:
ANB03323
UniProt:
A0A167BCW0
LinkDB
All DBs
Position
complement(3226846..3227154)
Genome browser
AA seq
102 aa
AA seq
DB search
MTKSELIDILARKQSHLAYKDVELSVKTILEQMSQALATGDRIEIRGFGSFSLHFRPPRV
GRNPKTGETVSLPGKYVPHFKPGKELRERVNEPEKPDKVAIR
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatcggaactcatcgatatactagctcgcaaacaaagccatctcgcgtacaaa
gatgtcgagctgtctgtgaagaccatcctcgaacagatgagccaggccttggcgactggg
gatcgcatcgaaatccgtggtttcggaagtttttccttacacttccgcccgccgcgggtg
gggcgcaacccgaagacgggcgagaccgtgtctcttcccgggaagtacgtgcctcatttc
aagcctggcaaggaactgcgggagcgggtgaacgagccggaaaagcctgacaaggtggcg
atccgctga
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