Ectothiorhodospira sp. BSL-9: ECTOBSL9_3205
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Entry
ECTOBSL9_3205 CDS
T04374
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ebs
Ectothiorhodospira sp. BSL-9
Pathway
ebs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECTOBSL9_3205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebs03019
]
ECTOBSL9_3205
03009 Ribosome biogenesis [BR:
ebs03009
]
ECTOBSL9_3205
Enzymes [BR:
ebs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECTOBSL9_3205
Messenger RNA biogenesis [BR:
ebs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECTOBSL9_3205
Ribosome biogenesis [BR:
ebs03009
]
Prokaryotic type
rRNA helicases
ECTOBSL9_3205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANB03527
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All DBs
Position
3499350..3501125
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AA seq
591 aa
AA seq
DB search
MNQEHLTPAAFAALGLPAPILKSLDESGYEEPTPIQAQSIPVLLSGQDLLGQAQTGTGKT
AAFALPLLAKLNPNIQYPQILVLAPTRELAIQVAEAFETYARHLPDFHVLPIYGGQSYTV
QLRQLKRGAQVIVGTPGRVMDHMRRGTLKLDNLTALVLDEADEMLRMGFIDDVEWVLEQT
PATCQLALFSATMPDVIRKVARKHLKSPQEVRIASTTSTASTIRQRYWRVSGLHKLDALT
RLLEHEDFDAMLVFVRTKTETVELAEKLAARGHACEALNGDIPQNLRERVVERLKRGQLD
IVVATDVVARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRPGEAILFVAPREQRML
QAIERATRQPIEAMHMPTTRDVNERRVERFRQQIADTLGGQDLEFFQNLVAEYVKENDAD
PMNVAAALAHMAQGDTPLLLDESREMAPPAPERGPRKGRERSMDGGQRPPKRKREGGGSR
GQAAVDEGMQRFLVDVGHQHGLKPGNLVGAIANEGGLDNSHIGKIDISEDHATVDLPAQM
PPALLNHLKKVWVCGQKLGLRPINDASPDRGAPRRFNTPRKAGPRRQARRS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaggaacatcttaccccagccgcatttgcggcgctgggcttgcccgcacccatc
cttaaatccctcgacgagagcggctacgaagagccgacgccgatccaggcccagagcatc
cccgtactgctctccggtcaggatctgctgggccaggcgcagaccggtaccggcaagacg
gcagcctttgccctgccgctgctggccaagctgaaccccaacatccagtaccctcagatc
ctggtgctggcccccacccgggaactggccatccaggtggcagaggccttcgagacctac
gcccggcacctgcccgacttccacgtgctgcccatctatggcgggcagtcctacaccgtg
cagctgcgccaactcaagcgcggcgcccaggtgatcgtgggcacgccaggtcgtgtgatg
gatcacatgcgccggggcaccctgaaactcgacaacctcacggccctggtgctggacgag
gccgacgagatgctgcgcatgggtttcatcgacgatgtggaatgggtgctggaacagacc
ccggccacctgtcagctggccctgttctccgccaccatgcccgacgtgatccgcaaggtg
gcccgcaagcacctgaaatctcctcaggaagtgcgtatcgcctccaccaccagcacggcg
tccaccatccgccagcgctactggcgggtcagtggcctgcacaagctggacgccctcacg
cgcctgctggagcatgaagactttgacgccatgctggtgttcgtgcgcaccaagaccgaa
acggtggagctggccgagaagctggctgcccgcggccatgcctgcgaagccctgaacggc
gacatcccgcagaacctgcgcgagcgggtggtggaacgcctcaagcgcggccagctggac
atcgtcgtggccactgatgtggtcgcgcggggtctggacgtggagcgcatcagccatgtg
gtcaactacgacatcccccatgacacggaatcctacgtgcaccgcatcggtcgcacgggc
cgcgccggtcgcccgggtgaggccatcctgtttgtggcaccccgcgaacagcgcatgctg
caggccatcgagcgggccacgcgccagccgatcgaggccatgcacatgcccaccacccgg
gacgtgaacgagcgtcgcgtggaacgcttccgccagcagatcgccgacaccctgggcggc
caggacctggagttcttccagaacctggtggccgagtacgtgaaggaaaacgatgccgac
cccatgaacgtggcagctgccctggcccatatggcccagggtgataccccgctgctgctg
gatgagagccgggaaatggccccgcccgcaccggaacgaggcccccgcaagggccgcgag
cggagcatggacggtggacagcgtccgcccaagcgcaagcgcgaaggtggcggcagtcgt
ggacaggcagcagtggatgagggcatgcagcgcttcctggtggacgttggccatcaacac
ggcctcaagccaggtaacctggtgggtgccatcgccaatgagggcgggctggacaattcc
cacatcggcaagatcgacatcagtgaagaccacgccacggtggatctgcctgcgcagatg
cccccggcgctgctgaatcatctgaagaaggtctgggtctgtggtcagaaactggggctg
cgccccatcaatgatgcctccccggaccgtggtgcacctcgccgcttcaacacgcctcgc
aaggcaggtccacgtcggcaagcccggcggtcctga
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