Shimwellia blattae: EBL_c08100
Help
Entry
EBL_c08100 CDS
T02111
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ebt
Shimwellia blattae
Pathway
ebt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EBL_c08100 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebt03400
]
EBL_c08100 (recB)
Enzymes [BR:
ebt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EBL_c08100 (recB)
DNA repair and recombination proteins [BR:
ebt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EBL_c08100 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_25
AAA_11
DMP19
Motif
Other DBs
NCBI-ProteinID:
AFJ45933
UniProt:
I2B5X9
LinkDB
All DBs
Position
821268..824828
Genome browser
AA seq
1186 aa
AA seq
DB search
MTEQTAQTLDPLTLPLTGARLIEASAGTGKTYTIAALYLRLLLGLGGEAAYPRPLGVEEL
LVVTFTEAATEELRSRIRDNIHALRIACLRGQSDNPLFLSLLEEIRDREQAARVLLLAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLLEDEHQLRYQACADFWRRHCYPLSKPV
AQAISTEWSGPQALLRDINRYLQGEAPRLRQPPAEGETLPQRHARIIATIDAIKQQWRAA
APDIAAIIADSGVDKRSFSSRNLPNWLSLVGEWAARETTDYQVPEALGKFAQSFLDEKTK
KGEPPRHGLFSAIDAFLSEPLTLRDLVIARAMAEIRYSVAREKRRRGEMGFDDMLSRLDD
ALRQPAGEALADAIRARFPAAMIDEFQDTDPQQYRIFRRIWLNQPAATLLLIGDPKQAIY
AFRGADIFTYMTARSEVTAHYTLETNWRSAPGMVHSVNRLFGQLPHPFLFRQIPFLPVSA
AKKNHRHRFTLNGNVQPAMTLWHTEGEGCGVSEYQQIMARQCAREIRDWLSAGARGEARL
WSGNDSRAVQASDITVLVRSRNEAAIVRDALGLLNIQSVYLSNRDSVFLAPEAREILWIL
QAVLAPEHEQGLRSAMATSILGLDARAIDALSQQESQWDALVEEFSAYREIWQRRGVMPM
MRALLAQRHVAENILASPAGERRLTDILHISELLQEAAARADSEHALVRWLAQHIEEPDT
SAASQQLRLESDRHLVKVVTIHKSKGLEYPLVWLPFIASYRQETRGLYHDRQTFETLLDP
ADDTQSLALAEEERLAEDLRLLYVALTRSVWHCSLGVAPLFRGNRSKKGATDFHHSAIGL
LIQQGQAMDAAQLAEALLALSDDDIHLQPTAEGDETPWQPPQPDSPPLAAREPGRQMADN
WRVTSYSGLQQHGRRAALDWVPRLDEDAVGEALAVQETPGVENRLTIHHFPRGASPGTFL
HGLLEALDFTQPPDPQWVLAQLLESGFDGQWQPVVMHWLEQLLIAPLNEQGLCLAELAPA
DKRAELAFYLPIASPLQARQLDQLIRAGDPLSAGCPPLDFRQVQGMLKGFIDLVFRHNGR
YYLLDYKSNWLGEDASAYTPQAMAGAMQEHRYDLQYQLYTLALHRFLRHRIADYDYQRHF
GGVIYLFLRGVDPASVGQGVYTARPSLALVNALDALFAGDQPKENP
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaaaccgcgcagacccttgatccgctgaccttaccgctcaccggcgcaagg
cttatcgaggcgtctgccggtacagggaaaacttacaccatcgccgccctctacctgcgc
ctgctgcttggcctggggggagaggcggcctacccgcgacccctgggggtggaagagctg
ctggtggtgacctttacggaggccgcaaccgaagagctgcgcagccgcattcgcgacaat
atccacgccctgcgcatcgcctgcctgcgcggccagtccgacaaccctttgtttctgagc
ctgcttgaagagattcgcgatcgggaacaggccgccagagtgctgctgctggccgagcgc
cagatggacgaagcggcaatttttaccattcacggcttctgccagcggatgctgaacctc
aatgcgtttgagtccggcatgctgtttgagcagcaactgctggaagatgagcatcagctg
cgctaccaggcctgtgccgacttctggcggcgccactgttacccgcttagcaagccggtg
gctcaggccatcagcacggagtggtccgggccccaggcgctgctgcgggacattaaccgc
tacctgcagggggaggccccccggctgcgccagccgccagcggaaggggaaacgctcccg
cagcggcacgcgcgcattattgccactattgacgccatcaaacagcagtggcgcgccgca
gcccccgatattgccgcgatcattgcggattccggggtggataaacgcagcttcagcagc
cgtaacttacccaactggctcagcctggtgggggagtgggccgcccgggagaccaccgac
taccaggtgccggaggcgctgggtaaatttgcccagtcgtttcttgatgagaaaaccaaa
aaaggcgagccgccgcgccatgggctgttcagcgctattgatgccttcctcagcgagccg
ctcaccctgcgggatctggtgattgcccgggcgatggccgaaattcgctatagcgtggcc
cgggaaaagcgccgccggggtgagatgggctttgacgatatgctcagccggctggacgat
gccctgcgccagcccgccggtgaggcgctggcagatgccatccgggcccgtttcccggcg
gcgatgattgatgagttccaggatacggacccccagcaataccgtatctttcgccgtatc
tggcttaaccagcctgcggccacgctgctgctgataggtgaccctaagcaggcgatttat
gcctttcgcggggcggatatcttcacctatatgaccgcgcgcagcgaagtgaccgctcac
tacacgctggagacaaactggcgctccgcaccgggaatggtacacagcgttaaccggcta
tttggccagctgccacacccgtttttgtttcgccagatcccatttctgccggtcagcgcg
gcgaagaaaaaccaccgccaccgttttaccctcaacggcaacgtgcagcccgccatgacc
ctgtggcacacagagggtgagggctgcggggtaagtgagtaccagcaaatcatggcccgc
cagtgcgccagagagatccgcgactggctgagtgccggtgcgcgcggtgaggcgcgcctg
tggtcggggaacgattcgcgggcggtgcaggcatcggatatcacggtgctggtgcgcagc
cgtaacgaggcggccatcgtgcgcgatgcgctgggcttgctgaatattcagtctgtctat
ttatctaaccgggacagtgtatttctggccccggaagcccgggagatattgtggatcctc
caggcggtgctggcaccggagcatgagcaggggctgcgcagcgccatggcgaccagcatt
ctcgggctggatgcgcgggctattgatgcactgagccagcaggagagccagtgggatgcg
ctggtggaagagtttagcgcctaccgggagatctggcagcggcgcggggtgatgccgatg
atgcgcgccctgctggcgcagcgccatgtggcggaaaacattctcgccagccccgcaggg
gagcggcgcttaaccgatattctgcacatcagcgaactgctccaggaggcggccgcccgg
gcagacagcgagcacgccctggtgcgctggctggctcagcatattgaagagccggatacc
agcgccgccagccagcaactgcgcctggaaagcgaccggcatctggtgaaagtggtcact
attcataaatccaaagggctggagtacccgctggtctggctgccgtttattgccagctac
cgccaggagacccgggggctgtatcacgaccggcaaacctttgaaaccctgctggatccc
gccgatgatacccaaagcctggcgctggccgaagaggagcgcctggccgaagatctccgc
ctgctgtatgtggccctgacccgctcagtctggcactgtagcctcggggtggcgccgctg
tttcgcggcaaccgcagtaaaaaaggggcaacggattttcaccacagcgccatcgggctg
cttatccagcaggggcaggcgatggatgcagcgcaactggctgaggcgctgctggccctg
agtgatgacgatattcaccttcagcccaccgccgaaggcgatgagaccccctggcagccg
ccgcaaccggacagcccgcccctggcggcccgggagccgggccgccagatggcggataac
tggcgggtgaccagttattccgggctacagcagcacggccgccgggccgcccttgactgg
gtgccgcgcctggatgaagacgccgtgggggaggcactggccgtgcaggagacgccaggc
gtggaaaaccggctgactatacaccattttccgcgcggggcctcgccgggcacctttttg
cacgggcttctggaagcgctcgacttcacccagccgccagacccccagtgggtgctggcg
cagttgctggagtccggcttcgatgggcagtggcagccggtggtgatgcactggctggag
cagctgcttatcgccccgcttaatgaacagggattgtgcctggcggagctggcaccggca
gataagcgggcggagctggcgttttacctgcctattgcctcgccgctacaggcccgccag
cttgaccagttgattcgcgccggggatccgctctctgcgggctgcccgccgctggatttc
cgccaggttcagggcatgctgaaaggctttattgatctggtgtttcgccacaacgggcgc
tactacctgctggactataaatccaactggctgggggaagatgccagcgcctatacaccg
caggcgatggcgggcgccatgcaggagcaccgttacgatttgcagtatcagctctatacc
ctggcgctgcaccgctttttgcgccaccggatagcggattacgactatcagcgccatttt
ggcggggttatctatctgtttttgcgcggggtggatccggcctctgtgggtcagggcgtc
tacactgcccggccctctctggcgctggttaacgccctggacgcgctgtttgccggggat
cagccgaaggagaacccatga
DBGET
integrated database retrieval system