Shimwellia blattae: EBL_c08290
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Entry
EBL_c08290 CDS
T02111
Symbol
ygdH
Name
(GenBank) rossmann fold nucleotide-binding protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
ebt
Shimwellia blattae
Pathway
ebt00230
Purine metabolism
ebt00240
Pyrimidine metabolism
ebt01100
Metabolic pathways
ebt01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
EBL_c08290 (ygdH)
00240 Pyrimidine metabolism
EBL_c08290 (ygdH)
Enzymes [BR:
ebt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
EBL_c08290 (ygdH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-ProteinID:
AFJ45949
UniProt:
I2B5Z5
LinkDB
All DBs
Position
complement(840827..842191)
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AA seq
454 aa
AA seq
DB search
MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSQTDNSKELLSRFEN
FDINVLRRERGVKLELINPPEDAFVDGRIIRSLQANLFAVLRDILFVSGQLSIAERFQRL
DTEDSAHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARSVGNQLGLRELN
ICTGCGPGVMEAPMKGAAVGHAQQRYKEGRFIGLTEPSIIAAEPPNPLVNELIIMPDIEK
RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMTPHNRDQLLPLILTGPKESADYFRVLD
DFVVSTLGEKARRHYKIIIDNPVEVARQMKKAMPQVKENRRETGDAYSFNWSIRIAQDLQ
MPFEPTHDNMANLNLHMDQPAEQLAAALRRAFSGIVAGNVKEVGIHAIEKYGPYKIHGDA
SIMQRMDELLQGFVVQHRMKLPGSAYIPCYEICR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacacatattagcccgctaggctcaatggatatgctgtcgcagctggaagtggac
atgcttaagcgcacggccagcagcgatctgtaccaactgtttcgtaactgctcactggcc
gtgcttaactccggtagccagaccgataacagtaaagaactgctttcccgctttgaaaac
ttcgacattaacgttctgcgccgcgagcgcggggtgaaactggagctgattaacccgccg
gaggacgccttcgttgacgggcgaatcatccgctcgctgcaggctaacctgttcgccgta
ttacgcgatattttgtttgtcagcgggcagctctcgattgcggagcgctttcagcgcctg
gatactgaagattcagcccatatcaccaacctggtgttctctattctgcgtaacgcccgg
gccctgcatgtgggcgaggccccgaatatggtggtctgctggggcgggcactccattaac
gaaaatgaatacctgtatgcccgcagtgtcgggaaccagctgggcctgcgggagctgaat
atctgcaccggctgtggcccgggggttatggaagccccgatgaaaggcgccgccgtcggc
catgcccagcagcgctataaagaaggccgctttattggccttaccgagccgtctatcatc
gccgcagagccgcctaacccgctggttaacgagctgattatcatgccggacattgaaaaa
cgccttgaggcgtttgtccggattgcccacgggattattatcttccccggcggggtggga
accgcagaagagctgctctatctgctgggtattctgatgaccccccacaaccgggatcag
ctgctgccgctgattctgaccggcccgaaagagagcgcggactacttccgggtgctggat
gactttgtggtcagcacgctgggtgaaaaggcccgtcgccattacaaaattattatcgac
aacccggtggaagtggcccgccagatgaaaaaagccatgccccaggtgaaagagaaccgc
cgcgaaaccggcgacgcctacagctttaactggtctatccggattgctcaggatctgcaa
atgccctttgagcccacccatgacaatatggcgaacctcaatctgcatatggatcagccc
gcagaacagctggcggcagcgctgcgccgggccttctccggcattgtggcgggtaacgtc
aaagaggtggggatccacgccattgagaaatatggcccctacaaaatccacggcgatgcc
agcattatgcagcgtatggatgagctgcttcagggatttgtggtccagcaccgcatgaag
ctccccggtagcgcctatattccctgttacgaaatctgccgttaa
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