Shimwellia blattae: EBL_c08690
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Entry
EBL_c08690 CDS
T02111
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebt03016
]
EBL_c08690 (truD)
Enzymes [BR:
ebt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EBL_c08690 (truD)
Transfer RNA biogenesis [BR:
ebt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EBL_c08690 (truD)
Prokaryotic type
EBL_c08690 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFJ45989
UniProt:
I2B635
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All DBs
Position
885785..886834
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AA seq
349 aa
AA seq
DB search
MIDVHNVTWLHGKPAATGLIKSSPEDFVVIEDLGFGPDGDGEHLLVRIRKEGCNTRFVAD
ALAKFLKVHAREVSFAGQKDKHAVTEQWLCVRLPGKETPDLQGFSLEGCEVLEYARHRRK
LRTGALRGNHFTLVLREVSDREEVTRRLNAIVRDGVPNYFGLQRFGLGGSNLSAARRWAA
DNRPIRDRNKRSFALSAARSALFNQIVSERLKKTDFNQVVDGDALQLAGRGSWFVAGADE
LAALQARVDSKELLITAALAGSGEPGTQREALLSEQQIMAEEPALLELLVRERVEAARRA
MLLFPRDLAWEWWDDVTVQLNFWLPAGSFATSVVRELITSQGDYADIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgtgcataatgtcacctggctgcacgggaaacctgccgccacgggcctgata
aaatccagcccggaagattttgtggtgattgaagatctggggtttggtccggatggcgac
ggcgagcacctgctggtgcgtattcgcaaagaggggtgcaacacccgttttgtggccgat
gcgctggcgaaatttctgaaagtgcatgcccgggaagtgagcttcgccgggcaaaaagac
aagcacgcggtgaccgaacagtggctgtgtgtgcgcctgcccggcaaggaaaccccggat
ttacagggcttttcccttgagggctgcgaagtgctggaatatgcccgccaccggcgcaaa
ctgcgcaccggcgcgctgcggggcaaccactttaccctggtcttgcgtgaagtctctgac
cgggaagaggtgacccggcgcctgaatgcgattgtgcgcgacggggtgcctaactacttt
ggcttacagcgctttggccttggcggcagtaatctgagtgcggcccggcgctgggcggcg
gacaaccgccccatccgcgatcgcaataagcgcagttttgccttgtctgcggcccgcagt
gcgttgtttaatcagattgtcagtgagcggctgaaaaaaacggattttaatcaggtcgtt
gacggggatgcgctacaattagccgggcgcggtagctggtttgtggccggggcggatgag
cttgcggccctgcaggcgcgggtggacagcaaagaactgctgattaccgccgcgctggcc
ggcagcggtgagcccggcacccagcgcgaggcgctcttgtctgaacagcagatcatggcg
gaagagcccgcgctgctggaattactggtgcgtgagcgtgtcgaagccgcccgccgcgcc
atgctgctgttcccgcgggatctggcctgggagtggtgggatgatgttactgttcagttg
aacttctggctgcccgccgggagttttgccaccagcgtggtaagggaattaataacgagt
cagggtgattatgcggatattgctgagtaa
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