Shimwellia blattae: EBL_c09870
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Entry
EBL_c09870 CDS
T02111
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebt03009
]
EBL_c09870 (srmB)
Enzymes [BR:
ebt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EBL_c09870 (srmB)
Ribosome biogenesis [BR:
ebt03009
]
Prokaryotic type
rRNA helicases
EBL_c09870 (srmB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
AFJ46097
UniProt:
I2B6E3
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All DBs
Position
complement(1009865..1011187)
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AA seq
440 aa
AA seq
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MTVTTFSELELDDSLLDALQDKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGSAIIDFSQRLLEDPVQVSATPSTRERKKIHQWYYRADTTEHKTALLV
HMLKQPEMSRSIVFVRKRERVHEVAQWLREAGIECCYLEGEMVQAKRNEAIKRLTDGRVN
VLVATDVAARGIDIADVSHVFNFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDYLLL
EKIGRYIQEPLKARVIDELRPTTRAPSVKLKGKPSKKTLAKREEKKKAQEKDQHRTKDRH
RVKKNIGKRRKPSATGPVTE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccactttttccgaactcgaacttgacgatagcctgctggacgcattgcag
gacaaggggttcactcgccccacggctattcaggccgccgctattccccctgccctggaa
gggcgtgacgttttaggctccgcgccaaccggaaccgggaaaactgccgcttatttgctg
cctgcgttacagcatctgctcgatttccctcgcaaaaagtccgggccaccacgcattctt
atcctgacgccaacccgtgagctggcaatgcaggtggctgaccatgcccgtgagctggca
aaaaatacccatctggatattgccaccatcaccgggggggtggcctatatgaaccacgcg
gaggttttcagtgaaaaccaggatatcgtggtggcaacaacgggccgtctgctgcagtac
ataaaagaagaaaactttgactgccgggcagtagaaacgctgatccttgacgaagcagac
cgcatgctggacatgggttttgcgcaggatatcgaacatattgccggtgaaacccgctgg
cgcaaacagacgatgctgttctccgccacgctggaaggcagcgcgattatcgacttctca
cagcgcctgctggaggatccggtacaggtttctgctaccccatccacccgcgagcggaag
aaaatccaccagtggtactaccgggcagacaccaccgagcacaaaaccgctctgctggtg
catatgctaaaacagccggagatgagccgctctattgtctttgtgcgcaaacgcgagcgg
gtgcatgaagtggcccagtggctgcgtgaagccggtatcgagtgctgctacctggaaggg
gaaatggtgcaggcgaagcgcaacgaagccatcaaacgcctgaccgatggccgggttaat
gtgctggttgcgacggatgttgccgcccgcggcattgatattgcggatgtcagccatgtg
tttaacttcgacatgccgcgcagtggtgatacctatctgcaccggattggccgtaccggc
cgcgctggtcgtaaaggaacggcaatctcgctggttgaagcccacgactacctgctgctg
gaaaagatcggccgctatattcaggagccgctgaaagcccgcgtaatcgacgagctgcgc
cccaccacccgcgccccgagtgtcaaactcaaaggcaagccttccaaaaaaacgctggca
aaacgggaagaaaagaaaaaagcgcaggaaaaagaccagcaccggaccaaagaccgccac
cgggtgaagaaaaatatcggcaagcgccgcaaacccagcgcaaccgggccggtaacagaa
taa
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