Shimwellia blattae: EBL_c25050
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Entry
EBL_c25050 CDS
T02111
Symbol
msbA
Name
(GenBank) lipid A export permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ebt
Shimwellia blattae
Pathway
ebt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EBL_c25050 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ebt02000
]
EBL_c25050 (msbA)
Enzymes [BR:
ebt01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EBL_c25050 (msbA)
Transporters [BR:
ebt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EBL_c25050 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
DEAD
Zeta_toxin
AAA_22
DUF87
AAA_25
AAA_29
ABC_membrane_2
RsgA_GTPase
APS_kinase
AAA_30
HUTI_composite_bact
nSTAND3
AAA_18
MMR_HSR1
AAA_24
NB-ARC
NACHT
AAA_5
AAA_15
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AFJ47591
UniProt:
I2BAN7
LinkDB
All DBs
Position
complement(2571409..2573157)
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AA seq
582 aa
AA seq
DB search
MHNDKDLSTWQTFRRLWPVISPFKMGLIVAAVALILNAASDTYMLSLLKPLLDDGFGKTD
RSVLMWMPLVVIGLMLLRGVTSYISSYCISWVSGKVVMTIRRRLFNHMMGMPVSFFDKQS
TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFIMMFYYSWQLSVILIVLAPVVSV
AIRIVSKRFRSISKNMQNTMGQVTASAEQMLKGHKEVLIFGGQEVEEDRFNKVSNRMRHQ
GMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMNSLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDMEQEKDEGERVVERAKGDIEFRNVTFTYPGRDVPALR
NINLTIPAGKTVALVGRSGSGKSTLASLITRFYDVDSGEVLLDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARTEEYDRAQIEQAAKMAYATDFINKMDNGLDTVIGENGVL
LSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGTIVERGTHAALLEQRGVYAQLHRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcataacgataaagatctctccacgtggcagaccttccgacggctctggccggtaatt
tcccctttcaagatggggctgattgtcgctgccgtggcgttaatcctcaacgcagcaagc
gatacctacatgctgtcgctgcttaaaccgttgctggatgatggtttcggtaaaactgac
cgctctgtgctgatgtggatgccgctggtcgtaattggcttaatgctgctgcgcggcgta
acaagctacatatcaagctactgtatctcctgggtgtccggcaaagtggtgatgactatc
cgccgccgcctgtttaaccacatgatggggatgccggtttccttttttgataagcagtcc
accggaaccctgctttcgcgcattacctatgactctgaacaggttgcgtcttcctcttcc
agcgcgctgataaccgtggtgcgtgaaggggcgtcgattatcggcctgtttattatgatg
ttctactacagctggcagctgtcggtgatcctgattgtactggcgccggtggtctcggtt
gctatccggattgtctctaagcgttttcgcagcatcagtaaaaatatgcagaacaccatg
gggcaggtaacagccagcgccgaacagatgctgaaaggccataaagaagtgctgattttt
ggcggccaggaagtggaagaagatcgctttaataaagtcagcaaccggatgcgccaccag
gggatgaaaatggtctccgcgtcgtcgatttctgatcccattattcagctgattgcctct
ctggcgctggcgtttgtcctgtatgctgccagcttcccgagcgttatgaacagcctgacg
gccggtacgataaccgtggtgttttcgtccatgattgccctgatgcgcccgctgaaatcg
ctgaccaacgttaacgcccagttccagcgcggtatggccgcctgccagacgctgttctcc
attctggatatggagcaggaaaaagacgaaggtgagcgggttgtggagcgcgcgaaaggg
gatattgaatttcgcaatgtgaccttcacctacccggggcgcgatgtaccggcgctgcgt
aatattaacctgacgatccccgccggtaagacggtggcgctggtcggccgctctggctcc
ggtaaatccacgctcgccagtctgatcacccgtttttatgatgtggactccggtgaagtg
ctgctggacggccacgatctccgggaatataccctgcgttcactgcgtaaccaggtggcg
ctggtttcccagaatgtgcacctgtttaacgacactatcgccaacaatatcgcctacgca
cgcaccgaagagtacgaccgtgcgcagatagagcaggccgcgaagatggcctacgccacg
gactttatcaacaaaatggataacggcctggatacggtcattggtgaaaacggcgtgctg
ctttccggcggccagcgccagcgtatcgccatcgcccgggccctgctgcgcgacagtccg
gtgctgatcctggatgaagccacctccgcactggataccgaatcggaacgggctatccag
gcagcccttgatgagctgcagaaaaaccgcacctcactggtgattgctcaccgcctctct
acgattgagaaggccgatgagatcgtggtggtggaagatggcaccatcgttgagcgcggc
actcacgcagccctgctggagcagcgcggtgtctatgcccagctgcaccggatgcagttt
ggccaatga
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