Shimwellia blattae: EBL_c25870
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Entry
EBL_c25870 CDS
T02111
Symbol
ybiS
Name
(GenBank) putative periplasmic protein
KO
K19235
L,D-transpeptidase YbiS
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ebt01002
]
EBL_c25870 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ebt01011
]
EBL_c25870 (ybiS)
Peptidases and inhibitors [BR:
ebt01002
]
Cysteine peptidases
Family C82
EBL_c25870 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
ebt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EBL_c25870 (ybiS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AFJ47673
UniProt:
I2BAW9
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All DBs
Position
2673883..2674803
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AA seq
306 aa
AA seq
DB search
MTMKLRTFFLAALAIAGICSNASAVTYPLPTDGSRLVGENQVVTVPQGSTLPLEYYAAQY
QLGLSNMLEANPGVDPYLPKAGTTLTIPQQLILPDTKHEGIVINSAEMRLYYYPKGTNTV
IVLPIGIGQLGRDTPVNWVTKVERKKAGPTWTPTAKMHAEYIAEGNPLPAVVPSGPDNPM
GLYALYIGRLYALHGTNANFGIGLRVSHGCVRLRKDDIKFLFDNVPVGTRVEFIDEPVKA
TTEPNGARYLEVHNPLSTSEAQIDNNEVVPITMTKAVTAVTSQADVDQNVVKQAVDTRSG
MPVRLN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaattacgcacgtttttcctggcagcactggcgatagctggtatttgtagc
aacgcttctgctgtgacttatccgctccctactgatggcagccgcctggtgggtgaaaac
caggttgttactgttccgcagggcagcactctgcccctggaatattacgccgcccagtat
cagcttggcctgtccaacatgctggaagccaacccgggcgttgacccttacctgccgaag
gccggtaccacactgactatcccccagcagttgatcctgccggataccaaacacgaaggt
attgtcatcaacagtgcggaaatgcgcctttattactacccgaaaggcaccaataccgtt
atcgtgctgccgatcggtatcggccagttaggccgtgataccccggtaaactgggtcacc
aaagttgagcgtaaaaaagccggtccgacctggacgccaacggccaaaatgcacgcggaa
tatatcgccgaaggtaacccgttaccggcggttgtgccttcaggaccggataacccgatg
gggctgtacgcgctctatatcggccgcctgtacgccctgcacggcactaacgctaacttc
gggattggcctgcgcgtgagccacggttgtgtgcgcctgcgtaaagacgatatcaaattc
ctgtttgataacgtgccggttggcacccgcgttgagtttatcgacgagccggtaaaagcc
accaccgagccaaacggcgcgcgctatcttgaagtgcataacccgctgtctaccagcgaa
gcccagattgacaacaacgaagtggtgccgatcaccatgaccaaggccgtgaccgccgta
acgtcacaggctgatgttgatcagaatgtggttaagcaggcggtagatacccgctccggg
atgccggttcgcctgaactaa
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