Shimwellia blattae: EBL_c26040
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Entry
EBL_c26040 CDS
T02111
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ebt
Shimwellia blattae
Pathway
ebt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBL_c26040 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebt03019
]
EBL_c26040 (rhlE)
Enzymes [BR:
ebt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EBL_c26040 (rhlE)
Messenger RNA biogenesis [BR:
ebt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EBL_c26040 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
HEM4
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
AFJ47690
UniProt:
I2BAY6
LinkDB
All DBs
Position
complement(2689968..2691335)
Genome browser
AA seq
455 aa
AA seq
DB search
MSFESLGLNPDILRAVAEAGYSEPTPVQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLL
QRLINNQPHAKGRRPVRALILTPTRELAAQVGENVRQYSSYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKSLAGKLLHNPEEVEVARRNTASEQVTQHVHFVDKKRKRELLSYLI
GRDNWEQVLVFTRTKHGANHLADQLKKDGITAAAIHGNKSQGARTRALADFKSGAIRVLV
ATDIAARGLDIEELPWVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREIPRMAIPGYEPDPSIKAEPIQNGRQGRGQGQGRGGDRRPANGGQGQPRSGQSD
RRQGTPRGEGARGGNGASAKPQQRRRPPRKPAAAQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatccctcgggttaaatccggatattttacgtgccgtggcggaagccggt
tatagcgaaccgaccccggtccagcgtcaggctattccggtggttcttgccggtcgcgat
ctgatggccagtgcccaaaccggtaccgggaaaacggcgggttttaccctgccattatta
caacgcttaattaataatcagccccacgccaaagggcgtcgcccggtgcgggcgctgatc
ctcaccccaacccgtgagctggcggctcaggtgggggaaaacgttcgtcagtacagcagc
tatctgaatatccgctccctggtggtgtttggcggtgtcagcattaacccgcagatgatg
aaactgcgcggcggtgtggatgtgcttatcgccaccccgggccgcctgctggatctggaa
caccagaacgcggtcagcctcgacagtgtggagattctggtgctggatgaagccgaccgg
atgctggatatgggctttatccatgatattcgccgggtcctggcaaaactgcctgcccgt
cgccagaacctgctgttctctgccaccttctcggatgagattaaatcgctggccggtaaa
ctgctgcataacccggaagaggtggaagtggcgcgccgcaacaccgcttctgaacaggtt
acccagcacgtgcactttgtggataagaaacgcaagcgcgagctgctctcttacctgatt
ggccgggataactgggagcaggtgctggtgttcacccggacaaaacacggggccaaccat
ctggcggatcagctgaaaaaagacggtatcaccgcggccgctattcacgggaacaagagc
cagggcgcgcgcacccgggcgctggctgattttaaatccggcgcgattcgcgtgctggtg
gcaacggatatcgccgcccgcggactggatatcgaagagctgccctgggttgttaactat
gagctgcccaacgtaccggaagattatgtgcaccgtattggccgtaccggccgtgcggcc
gccaccggtgaggcgctctcgctggtgtgtgtggatgagcataaactgctgcgcgatatt
gaacgcctgctgaagcgcgaaattccgcgcatggcgatcccgggctatgagccggatccg
tccattaaagcggagcctatccagaatggccgccagggccgtggtcagggccagggtcgc
ggtggcgatcgacgcccggcaaacggtggtcagggccagccgcgcagcggacagagcgat
cgccgccagggcactccccgtggggaaggggctcgtggtggtaacggggccagcgccaaa
ccccagcagcgccgccgcccgccgcgtaaaccggcagccgcacagtaa
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