Shimwellia blattae: EBL_c27240
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Entry
EBL_c27240 CDS
T02111
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ebt
Shimwellia blattae
Pathway
ebt03030
DNA replication
ebt03430
Mismatch repair
ebt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBL_c27240 (holA)
03430 Mismatch repair
EBL_c27240 (holA)
03440 Homologous recombination
EBL_c27240 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebt03032
]
EBL_c27240 (holA)
03400 DNA repair and recombination proteins [BR:
ebt03400
]
EBL_c27240 (holA)
Enzymes [BR:
ebt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBL_c27240 (holA)
DNA replication proteins [BR:
ebt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EBL_c27240 (holA)
DNA repair and recombination proteins [BR:
ebt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EBL_c27240 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AFJ47795
UniProt:
I2BB91
LinkDB
All DBs
Position
2801983..2803014
Genome browser
AA seq
343 aa
AA seq
DB search
MIKLYPEQLRAQLSDGLRAAYLLLGNDPLLLQESQDAIRHAGAEQEFTGYHTVAIDATTD
WNALFALCQELNLFASRQTLLLQLPENGPNAAIASQLETLVSLLHEDLLVIFRGNKLTKA
QENQAWYRALNDSGVQVACMTPEQAQLPRWVQNRASQMSLSLDNAAVQLLCYCYEGNLLA
LSQALERLALLWPDGKLTLPRVEQAVNSAAHFSSWHWVDAVLAGKTKRALHILRQLKLEA
SEPVLLLRALQRELLQLVHLKRQSATTPLKALFDQQRVWQNRRVLITEALNRLSREQLDQ
AVRLLSHAELTLKQDYGQNIQDTLESLTLLLCNAGLPEIFTYE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgataaagctgtacccggagcaactacgcgcgcagctcagtgacgggctgcgcgccgct
tatctgctactgggtaatgacccgttactgctccaggaaagccaggatgccatccgccat
gctggtgcagaacaggaatttaccgggtatcacacagtggcgattgacgccaccaccgac
tggaacgcgctctttgccctgtgccaggagctgaacctgtttgccagccgccagacactg
ctgctgcagctaccggaaaatggccccaacgccgccattgccagccagcttgagacgctg
gtcagcctgctgcatgaggatctgctggtgattttccgcggcaataagctgacaaaagcc
caggaaaatcaggcctggtatcgcgcccttaacgatagtggcgttcaggtggcctgcatg
accccggagcaggctcagttgccgcgctgggtgcagaaccgggccagccagatgtcatta
tcgctggataacgcggcggtacagttactgtgctactgctatgaaggaaacctgctggcc
ctctcccaggcgctggagcgtctggccctgctgtggccagacggtaaactcaccctgccc
cgggtggagcaggccgttaacagcgccgcgcacttttccagctggcactgggtagatgcg
gtgcttgccgggaaaaccaaacgcgccctgcacatcctgcgccagcttaagctggaggcc
agcgagccggtactgctgctgcgcgccctgcagcgcgaattactgcaactggttcacctg
aagcgccagtcggccaccaccccgctaaaagcgctgtttgatcagcagcgggtatggcag
aaccggcgggtgctgataaccgaagcgctcaaccgcctcagccgcgagcagcttgatcag
gctgtgcgcctgctcagccacgcggagcttaccctcaagcaggactacggccagaatata
caggacacgctggaaagcctgacgttgctgctgtgcaacgccgggttgccggaaatattc
acctatgaatga
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