Shimwellia blattae: EBL_c29280
Help
Entry
EBL_c29280 CDS
T02111
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebt03400
]
EBL_c29280 (sbcC)
DNA repair and recombination proteins [BR:
ebt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EBL_c29280 (sbcC)
Archaeal homologous recombinant proteins
EBL_c29280 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
AAA_21
cobW
nSTAND3
MobB
ABC_ATPase
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFJ47998
UniProt:
I2BBU4
LinkDB
All DBs
Position
3017070..3020243
Genome browser
AA seq
1057 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASCGLFAITGPTGAGKTTLLDAICLALYHKTPR
LDTISHTRNDIMTRDTAECLAEVEFEVQGCAYRAFWSQSRARNNPGGKLQPPRVELARCA
DGKILADKIKDKLEAIARLTGLDYGHFTRSMMLSQGQFAAFLNADANDRAALLEELTGTE
IYGRLSAAVFDQYKEVKNQLAQAEATAAGVHLLDEAQKQALAQRLQALTEQEKSLQARLQ
TLQQAAQWLAREQQLSAARETARQQHQAAHQALEDAAPRLARLTASQPAEKLRPLWRQRE
EQQHSLLASQQQLEQVNTHLQEATIRRQQIRNLAAERQQHLSHEIQQLETWLKAHERYRD
WQNELTGWRATFRQRQELILSQQEQAREQQLRQQKQAALPPSGLEISDEETTRTLQHLES
ERPLRQQLSTLLAGFTPLNQRREALAGQTRQQQAQLEILTRQTEEKRQQWSQKKRECDDV
RKICELEATIASLAEHRARLQPGAPCPLCGSEQHPAVVRYQALAPGENRQRLLALEQALQ
QLGEAGATLKGSLSQLTRQHQHACQEQQQLEAQHQQARGQWQALCARLGQHFPPGNQATA
WLADQETREQQLRLHQQHLAFEQQQRDAQQRLSTLQAAQARLEAELTSQLTPMGLTPPPP
EASEPWLAEREAEARHWQQQQTLLGTLQSQLAKLFPLLEGLADSGIRVPPLDAASAESAL
AQWQHTDHLAATLLGEQQSLTRQLARDTERLAQGQQAFDEALNASPFPDSAAFLAALLDD
TLRTELEALRDRLNKTLIECQTLDTQAQQALEAHRAARPGQLEAQETPQSLALAQESAHQ
ALRDCTTQQGEIQHQLRADADNQLRLRDLLDNIARQRQQAEDWGCLNELIGSKEGDKFRR
FAQGLTLDNLVWLANQQLLRLHGRYFLQRKESEALELEVVDTWQADAVRDTRTLSGGESF
LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDTLNASGKHIGVISHV
EAMKERIPVQIKVRKVNGLGFSRLAKTYAVEHNSHAE
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcggttaaaaaacctcaactccctgaaaggggaatggaaaatc
gattttacccgggagcctttcgccagctgcgggctgtttgccataaccgggcccaccggg
gccgggaaaaccaccctgctggatgccatctgtctggcgctgtaccacaaaacgccgcgc
ctggacaccatctcccatacccgcaacgacattatgacccgggacacggccgagtgcctg
gccgaggtggaatttgaggttcagggctgtgcctaccgggcattctggagccagagccgg
gcgcgcaacaaccccgggggaaagctacagcccccccgggttgagctggcccgctgcgcg
gacggtaaaatactggcggataaaatcaaagacaagctggaggctatcgcccggctgacc
gggctggattacggccactttacccgctcgatgatgctctctcaggggcagtttgccgcc
ttcctcaacgcggatgccaacgatcgcgccgccctgctggaagagctcaccggcaccgaa
atctatggccgcctgtctgccgccgtcttcgaccagtataaagaggtgaaaaaccagctg
gcccaggccgaagcgaccgccgcaggcgtccacctgctggacgaggcgcaaaaacaggcc
ctggcacaacgtttgcaagcacttactgagcaggagaaaagcctgcaggccaggcttcag
accctgcaacaggccgcccagtggctggcccgcgagcagcagctcagcgccgcgcgggaa
acggcccgccagcaacaccaggccgcacatcaggccctggaggatgcggccccccgtctg
gcccggctgactgccagccagccggcagaaaaactccgccccctgtggcgccagcgtgaa
gagcagcagcactccctgctcgccagccagcagcagctggagcaagtaaatacccactta
caggaagccaccatccgccgccagcagatccgcaacctggccgcagagcggcagcagcac
ctcagccatgagattcagcagctggaaacctggcttaaagcccatgagcgctaccgcgac
tggcagaacgagctgaccggctggcgggccaccttccgccagcgccaggagctgatcctc
agccagcaggagcaggcccgcgagcagcaactgcgccagcaaaaacaggcggcgctgccg
ccttccgggcttgagatcagcgatgaagagaccacccggacactgcaacacctggaaagt
gagcgcccgcttcgccagcaactcagcaccctgctggccgggttcaccccccttaaccag
cgccgggaggcccttgccgggcagacccgccagcagcaggcacagctggagattctgacc
cgccagaccgaagagaagcgccagcagtggagccagaaaaaacgcgagtgtgatgacgtc
agaaagatctgcgaactggaggccaccatcgccagcctggcagagcaccgggcgcgacta
cagcctggcgccccctgccccctgtgcggctcagaacagcacccggcagtggtgcgctac
caggcgctggcccccggcgaaaaccgccagcgcttactggcgctggaacaggcgctacag
caactgggtgaagccggtgccaccctgaaaggcagcctgagccagctcacccggcagcat
cagcacgcctgccaggagcaacagcagctggaggcacagcaccagcaggcccggggccag
tggcaggcgttgtgtgcccggctggggcagcacttcccgccgggaaaccaggccactgcc
tggcttgcagaccaggagacccgcgaacagcaactgcgcctgcaccagcagcatctggcg
tttgagcaacaacagcgcgacgcacagcaacgcctgagcacccttcaggctgcccaggca
cgcctggaggcagaattaaccagccagctcaccccgatggggctgaccccgccaccgccc
gaggccagcgagccctggcttgctgaacgcgaggcagaagcccgccactggcagcaacag
caaaccctgctgggcacattacagagccagctggcgaagctcttccccctgctggaaggg
ctggcggatagcggtatcagggtgccgcccctggatgccgccagtgcagaaagcgccctg
gcccagtggcagcacacggatcaccttgccgccacactgctgggtgagcaacagagcctg
acgcgccagctggcgcgggatacggagcgcctggcacagggacaacaggcctttgacgag
gccctgaacgccagccccttcccggacagcgcggcctttcttgccgccctgctggacgac
acattgcgcaccgaactggaggccctgcgcgacaggctgaacaaaacgctgattgaatgc
cagacccttgatacccaggcacagcaggcgctggaggcgcaccgcgcggcccggcccggg
cagctggaggcgcaggaaaccccgcaatccctcgccctggcgcaggaaagcgcccatcag
gcgctgcgcgactgcaccacccaacagggggaaattcagcaccagctccgggccgatgca
gacaaccagctgcggctgcgggatctgctggataacattgcccgccagcgccagcaggcg
gaggactggggctgccttaatgagcttatcggctcaaaagagggggataaattccgccgc
ttcgcccaggggctgaccctggacaatctggtctggctggcaaaccagcagctactgcgg
ttacacgggcgctattttctgcagcgtaaagagagcgaagcgctggagctggaagtggtc
gacacctggcaggcagatgcggtgcgcgatacccgcaccctctccggcggggagagcttc
ctggtgagcctggccctggcgctggcgctctctgatctggtcagccacaaaacgcggatc
gactcgctctttcttgatgaaggcttcggcacactggatgcccagacactggacacagcc
ctggatgccctcgacaccctgaacgccagcggtaaacatattggggttatcagccatgtt
gaggccatgaaggagcgcatcccggtacaaatcaaggtgcgcaaagtgaacgggctgggc
tttagccggctggcaaaaacctatgcggttgagcacaacagccacgcggaataa
DBGET
integrated database retrieval system
