Shimwellia blattae: EBL_c32190
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Entry
EBL_c32190 CDS
T02111
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ebt
Shimwellia blattae
Pathway
ebt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EBL_c32190 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebt03019
]
EBL_c32190 (pcnB)
Enzymes [BR:
ebt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EBL_c32190 (pcnB)
Messenger RNA biogenesis [BR:
ebt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EBL_c32190 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AFJ48282
UniProt:
I2BCM8
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All DBs
Position
3312635..3313996
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AA seq
453 aa
AA seq
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MLNRDDSVETARDTQPHITVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEEQA
DRQQSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGLNDLRAGII
RLIGTPETRYREDPVRMLRAVRFAAKLNMTIEPATGEPIPRLSTLLNDVPAARLYEESLK
LLQSGYGYNTYRLLCEYQLFQPLFPTITRYFTENGDSPMERIIAQVLKNTDNRIHNNMRV
NPAFLFAAMLWYPQLEMTQKLAQESGLPWFDAFALAMNDVLDEACRALAIPKRITSLIRD
IWQLQLRMSRRQGRRAWKLMEHPKFRAAFDLLALRAEVEHNGELQRLATWWAEFQVAAPP
LQKEMINQLGDDPARRRPRRPRKRPAPRREGNG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaaccgcgatgatagcgtggagacggcgcgcgacacacaaccacacataacggtg
atcccccgggagcagcactctatttcgcgtaaagacatcagtgaaaatgcgctgaaggtg
ctgtatcgcctgaataaatcaggatacgaagcctacctggtcggcggcggtgtgcgtgat
ctgctgttgggcaaaaaaccaaaagatttcgacgtgaccaccaacgccaccccggatcag
gtgcgtaaactgttccgtaactgccgcctggtggggcgccgtttccgtctggcccatgtg
atgtttggcccggaaatcattgaagtggcgacctttcgcggccaccacgaagagcaggcc
gaccgccagcagtcccagcgcggccagaacggcatgctgctgcgcgacaatatcttcggc
tccattgaagaagacgcccagcgccgggatttcaccattaacagcctctactacagcgtt
gcggattttaccgtccgggattatgtgggcggcctgaacgatctgcgtgccgggatcatt
cgcctgattggcacaccggaaacccgctaccgggaagatccggtccgcatgctgcgcgcc
gtgcgctttgccgccaaactgaatatgaccattgagcccgccaccggcgagcctatcccg
cgcctgtctacgctgctaaatgatgttcccgccgccagactttatgaagagtcgctgaag
ttattgcagtccggctacggctacaatacctaccgcctgctgtgtgaatatcaactcttt
cagcccctgttcccgaccattacgcgctacttcaccgaaaacggcgacagcccgatggag
cgcatcatcgcccaggtgctgaaaaataccgataaccgcatccataacaacatgcgggtg
aacccggcgtttctgtttgccgccatgctgtggtatccccagctggagatgacccagaaa
ctggcccaggagagcggcctgccgtggtttgacgccttcgccctggcgatgaacgatgtg
ctggatgaagcctgccgcgcgctggcgattccgaagcgcattacctcgctgattcgcgat
atctggcagctacagttgcggatgtcccgccgccaggggcgtcgcgcctggaagctgatg
gagcatccgaaattccgcgccgcttttgatctgctcgccctgcgggctgaagtggagcac
aacggcgagctgcaacgcctggccacctggtgggctgaattccaggttgccgcgccgccg
ttacaaaaagagatgatcaaccagttgggtgatgatcctgcccgccgccgtccgcgccgc
ccgcgcaagcgcccggcaccgcgccgcgagggcaatgggtga
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