Shimwellia blattae: EBL_c32940
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Entry
EBL_c32940 CDS
T02111
Symbol
hepA
Name
(GenBank) RNA polymerase-associated helicase protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ebt03021
]
EBL_c32940 (hepA)
Transcription machinery [BR:
ebt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
EBL_c32940 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
NUP120_helical
Motif
Other DBs
NCBI-ProteinID:
AFJ48357
UniProt:
I2BCV3
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All DBs
Position
3398336..3401242
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARMVTLLFPATDENRLYSRNDSPITRVMFNPGDT
VTSHEGWQLKVDEVKAENGLLTYIGTRMDTEETGVPLREVFLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRSRKYQSEQSRQPWSGLRGMRTSLIPHQLHIARDVGHRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DSTNPFDTEQLIICSLDFVRRNKQRLENLCDAEWDMMVVDEAHHLVWSEEAPSREYQAIE
QLAEHIPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFGQFVAEQQHYRPVADAVALLL
EGNHLSRDELNTLSELIGEQDIEPLLQAANSDSADAQDARKELIHMLMDRHGTSRVLFRN
TRNGVKGFPQRSLSTIKLPLPAQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
SATWWNFDPRVEWLMGYLTRHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQEVLVQWYHEGLDAFEHTCPTGRTIYDSVCSQLVEYLAAPDNT
TGFDELIKTCRAQHDALKVQLEQGRDRLLEIHSNGGEAAQQLADDIAAQDNDPALVNFAM
NLFDIIGINQDDRGEHMIVLTPSDHMLVPDFPGLPEDGCTITFNRDVALSREDAQLVTWE
HPIIRNGLDLILSGDTGTSAISLLKNKALPVGTLLVEMMYVVEAKAPKQLQLGRFLPATP
VRMLLDKNGTNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHGILQLAETQVEKEAR
AIIDAARHEADETLSAELARLEALKAVNPNIRDDELEAIESNRAQVMEALDQASWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgacacagagagcgaactgggtttaggg
actgtagtcgccatggatgcgcgaatggtcactctgctatttcccgccaccgatgagaac
cgcctctactcccgcaatgactcccccatcacccgggtgatgtttaacccgggtgatacc
gtgaccagccacgaaggctggcagctgaaagttgacgaagtaaaagcagaaaatggtctg
ttgacctatattggcacccgcatggataccgaagagaccggtgtgccgctgcgcgaggtc
ttcctcgacagtaaactggtcttcagcaagccccaggaccggctgtttgccgggcagctg
gaccggatggaccgctttgccctgcgttttcgctcccgtaaataccagagcgaacagtcc
cgccagccctggagcggcctgcgcggcatgcgcaccagccttatcccccaccagctgcat
atcgcccgtgatgtgggccaccgccacgcaccgcgcgtactgctggcagacgaagtgggc
ctcgggaaaaccattgaagccgggatgataatccaccagcagttactggccggggccgct
gaacgcgtgctgattattgtgccggaaaccctccagcaccagtggctggtagagatgctg
cgccgctttaacctgcgcttcgccctgtttgatgacgagcgctatgcggaagcccagcac
gacagcaccaacccgtttgataccgaacagttaattatctgctcgctggattttgtgcgc
cgcaacaagcagcgtctggaaaacctgtgtgacgccgagtgggacatgatggtggtggac
gaagcccaccacctggtgtggagcgaagaggccccgagccgtgaataccaggccattgaa
cagctggcggagcatatcccaggcgttttgctgctgaccgccaccccggaacagctgggc
atggaaagccactttgcccgtctgcgcctgctggatccgaaccgttttcatgacttcggg
cagtttgtggcagagcaacagcactaccgcccggtcgccgatgcggtggcactcctgctg
gaaggcaaccacctgagccgcgatgagctcaacaccctgagtgagcttatcggcgagcag
gatatcgagccgctgctgcaggcggcaaacagcgacagcgccgacgcgcaggatgcccgt
aaagagcttatccatatgctgatggaccgccacggcaccagccgcgtgctgtttcgcaac
acccgtaacggggtcaaaggcttcccccagcgcagcctctccaccattaaattgccgctg
cctgcccagtaccagaccgcgattaaggtctccgggatcatgggggcgcgtaaatccgct
gaagagcgcgcccgggatatgctctacccggagcagatctatcaggaatttgaaggggac
tccgccacctggtggaactttgatccgcgcgtggaatggctgatgggctacctgacccgc
caccgctcacaaaaagtgctggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtgctgcgcgagcgcgaggggatccgcgccgccgtcttccacgaaggcatgtcgata
atcgaacgggaccgggccgccgcctggtttgccgaagaggacaccggcgctcaggtactg
ctgtgctccgaaatcggctctgaagggcgtaacttccagtttgccagcaacctggtgatg
ttcgacctgccgttcaacccggacctgctggagcagcgtatcggccgcctggaccgtatc
ggccaggctcatgatatccagatccacgtgccctacctggaaaaaaccgcccaggaagtg
ctggtccagtggtatcacgaagggctggatgcctttgaacacacctgccctaccgggcgc
accatttacgacagcgtctgcagtcagctggtggaatacctggccgccccggacaacacc
accggttttgatgagctgattaaaacctgccgcgcccagcatgacgcgctgaaagtgcag
ctggagcagggccgcgaccggctgctggagatccactccaacggtggcgaagccgcccag
caactggcggatgatattgccgcccaggataacgatccggcgctggtgaacttcgccatg
aacctgtttgatatcatcgggattaaccaggacgatcgcggcgagcatatgattgtgcta
accccgtctgatcatatgctggtgccggacttcccgggcctgccggaagacggctgcacc
atcacctttaaccgcgatgtggctctgtcccgggaagatgcccagctggtcacctgggag
cacccgattattcgcaatggcctggatctgatcctctccggggatacgggcaccagcgca
atttcactgctgaaaaacaaagcgctgccggtcggcaccctgctggttgagatgatgtac
gtggtggaggccaaagcgccgaaacagctgcaactcggccgcttcctgccggcaaccccc
gtccgtatgctgctggacaaaaacggcaccaacctggcagcccaggtggagtttgaaagt
tttaaccgccagctgagcgcggtgaaccgccatacgggcagcaagctggtgaacgcagtc
cagcaggatgtccacgggattttacagctggcggaaacccaggtggaaaaagaggcccgg
gcgattatcgatgcggcccgtcacgaagcggatgaaacactgtctgcggagctggcgcgc
cttgaagccctcaaagcggtgaacccgaatatccgtgatgatgagctggaggccattgaa
agcaatcgcgcccaggtgatggaagccctggatcaggccagttggcggctggatgccctg
cgcctgattgtggtcacccaccagtaa
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