Shimwellia blattae: EBL_c39040
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Entry
EBL_c39040 CDS
T02111
Symbol
rfaG
Name
(GenBank) lipopolysaccharide core biosynthesis protein
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
ebt
Shimwellia blattae
Pathway
ebt00540
Lipopolysaccharide biosynthesis
ebt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EBL_c39040 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
EBL_c39040 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
ebt01005
]
Core region
EBL_c39040 (rfaG)
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GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AFJ48932
UniProt:
I2BEH8
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Position
complement(4041933..4043057)
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AA seq
374 aa
AA seq
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MIVAFCLYKYFPFGGLQRDFLRIASTVAERGHTVRVYVQSWQGERPTGFEIIVVPVSART
NHGRNAQYYHWVSAHLGQHPADRVVGFNKMPGLDVYYAADVCYAEKVAREKGFFYRLMPR
YRHFAAFERAVFRQGAATKLLMLTDKQIADFRKHYATEPERFFILPPGIYPDRKYSNQPA
DARARYRSKNHIDSQQYLVLQVGSDFSRKGVDRSIEAVAALPAELRSRVTLYIVGQDKPG
RFAQLAKRLGVGANVHFFAGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVITS
AVCGYAHYISEAGCGEVIAEPWQQSALNGALSKALCNKALRDAWADNARHYADTQDLYSL
PEKAADIIIGDLHG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttgcattttgcctgtataaatatttcccttttggcggcctgcagcgcgatttt
ttgcgtattgcctctaccgtggcggagcgcggccatacggtgcgcgtttacgttcaatcc
tggcagggggagcgacccaccgggtttgagattattgtggttccggtaagtgcgcgcacc
aatcacgggcgtaatgcgcagtattaccactgggtcagcgcgcatctgggccagcatccg
gccgatcgggtggtggggtttaataaaatgcccggccttgatgtctattacgcggcggat
gtgtgctatgccgagaaagttgcccgggaaaaggggtttttctaccgcttaatgccgcgt
tatcgtcattttgctgcgttcgaacgggcggtatttcgccagggggccgcaacaaaatta
ctgatgctgacggataagcaaattgccgattttcgcaaacattacgccaccgagcccgaa
cgcttctttattttacctcccgggatttacccggaccggaaatacagcaatcagcctgct
gacgcccgcgcgcgctatcgcagtaagaatcatattgatagccagcaatatctggtgctg
caggtgggctcggacttcagccgtaaaggggttgatcgttccattgaagctgtggcggcg
ctgcccgctgagttgcgcagccgggtgaccctctacattgtcgggcaggataagccggga
agattcgcacagctggcaaaacggcttggggtgggcgccaatgtgcactttttcgccggg
cggaatgacgtttctgagctgatggccgccgcggatctgctgctgcacccggcttaccag
gaagcggcgggcattgtgctgctggaggctattaccgccggcctgccggtgattaccagc
gcagtatgcggttatgcgcactatattagtgaggcaggctgtggcgaggtgatcgctgag
ccctggcagcaaagtgcgcttaatggggcgctgagcaaggccctgtgtaataaggcactg
cgtgatgcctgggctgataatgcccgccactatgcggatactcaggatttatacagtctg
ccggaaaaggcggcggatattattattggtgatttacatggttga
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