Shimwellia blattae: EBL_c40130
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Entry
EBL_c40130 CDS
T02111
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebt03016
]
EBL_c40130 (trmE)
Transfer RNA biogenesis [BR:
ebt03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
EBL_c40130 (trmE)
Prokaryotic type
Methyltransferases
EBL_c40130 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
ABC_tran
AAA_28
Roc
Arf
SRPRB
PDT
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AFJ49037
UniProt:
I2BET3
LinkDB
All DBs
Position
complement(4154106..4155470)
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AA seq
454 aa
AA seq
DB search
MSHNDTIVAQATPPGRGGVGILRVSGRQASDVARAVLGKLPKPRYADYLPFRDADGSTLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTLPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSGRVNELVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAGLNAVIASLDTVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRD
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDATSPAAIWPDFVARLPDTLPLTVVRNKADITGEPLGLTEVNGHSLVRLSAR
TGEGVDILRDHLKQSMGFETSMEGGFLARRRHLQALELAAVHLQQGKDQLLGARAGELLA
EDLRQAQQALSEITGAFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataacgacactatcgttgcccaggcaacgcctcccggccgtggcggggttggt
attctgcgcgtctccggccgacaggccagcgacgtcgcccgggcggtactcggtaaactc
ccgaaaccgcgctacgccgactatcttcccttccgggacgcagacggcagcaccctggat
caggggattgcgctgtggttcccggggccaaactcgtttacgggcgaagacgtgcttgag
ctacagggccacggcggcccggtgatcctcgatctgctgttaaaacgtatcctgaccctg
cccggcctgcgtattgcccgcccgggggagttctccgaacgggcgttcctcaacgataag
ctggatctcgcccaggcggaggccattgccgatctgatagacgccagctcagagcaggca
gcccgctcggcggtgaactcgctccagggggcattctccggccgggtcaatgaattagtg
gaagcactcactcacctgcgcatctatgtggaagcggcgatcgacttcccggatgaggag
atagacttcctgtctgacggcaaaatcgaagccgggctcaacgcggtgatcgcaagcctg
gacacggtacgcgccgaagcgcgccagggcagcctgctgcgcgaaggcatgaaagtggtg
attgccgggcgcccgaacgccgggaaatccagcctgctgaacgccctggccggccgcgat
gccgccattgtgaccgatatcgccgggactacccgtgacgtgctgcgtgagcatatccac
attgacgggatgccgctgcatatcatcgacaccgccgggctgcgcgaggccagcgacgaa
gtggagcgtatcggtatcgagcgggcctggcaggagattgaacaggcggaccgggtgctg
tttatggtggatggcaccaccacagacgccaccagcccggcggctatctggcccgatttt
gtcgcccgcctgccggataccctaccgctgaccgtggtgcgtaacaaagccgacattacc
ggcgaacctctggggctgacggaagtaaatggtcactcactggtgcgactctccgcccgg
accggggagggtgtggatattctgcgcgaccacctgaaacagagcatgggctttgaaacc
agcatggaaggtggctttctggcccgccgccgccaccttcaggcactggagctggccgcg
gttcatttgcaacagggcaaagaccagttgctcggcgcccgcgccggggagctgctggca
gaggacttacgccaggcccagcaggcgctgagcgagatcaccggcgcattcacctctgac
gatctgctggggcggattttctccagcttttgcatcgggaagtaa
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