Enterobacteriaceae bacterium S05: CUC76_03630
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Entry
CUC76_03630 CDS
T05725
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebu03019
]
CUC76_03630
Enzymes [BR:
ebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CUC76_03630
Messenger RNA biogenesis [BR:
ebu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CUC76_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
WHD_HA2
AAA_22
nSTAND3
T2SSE
nSTAND_NTPase5
NACHT
DUF6145
ResIII
PhoH
AAA_16
SLFN-g3_helicase
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AWB60774
LinkDB
All DBs
Position
complement(719293..723195)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMAQEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVGARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKQASKETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKEALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFNQLHDK
VRAELNETVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKIESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQVTP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccatccttcaggagatggcgcaggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaatctgccggttagc
cagaaaaaacaagaaattctcgaggcggtacgcgatcaccaggtggtgattgtcgccggg
gagaccggttcgggtaaaaccacccagctgccaaaaatctgcatggagctgggccgcggg
ctgaaagggctaatcggccatacccagccgcgtcgtctggccgcgcgaaccgtcgccaac
cgtatcgccgaggagctgcaaacggagccgggcggctgtatcggctataaggtccgcttt
agcgatcacgtcagcgacaacaccatggtcaagctgatgaccgacggtattctgctggct
gagatccagcaggatcgcctgctgatgcagtacgacaccatcattatcgatgaagcgcac
gagcgcagcctgaacattgacttcctgctcggctatctgaaagagctgctgccgcgccgt
cctgacctgaaaattatcatcacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagctgcaggcgatctttgat
gccgtcgatgagctcggacgcgaagggcccggcgatattctgatctttatgagcggcgag
cgggagattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgctcgcttgtccaacagcgagcagaaccgcgtcttccagccgcacagt
ggacgacgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtaccgggcatt
aagtacgttatcgatcccggtaccgcccgtatcagccgctacagctaccgcaccaaggtg
cagcgcctgccgatcgagccagtttcccaggcgtccgccaaccagcgaaaaggccgctgc
ggtcgcgtctcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgatccggaaattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgttcgttgaagcgccggataagcgc
aacattcaggacggcgtgcgcctgctggaagagctgggcgccatcaccaccgatgagcag
gccaccgcctacaagctgaccccgatgggccgtcagcttagccagttgccggtagacccg
cgtctggcgcggatggtgctggaggcgcagaagcacggctgcgtgcgagaagcgatgatc
atcacctccgcgctgtcgattcaggatccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacaccgccgctttcacgataaagagtctgacttcctcgcctttgtgaac
ctgtggaactatctcggcgaacagcagaaagccctgtcgtcgaatcagttccgccgtcag
tgccgggtcgattttctgaactatctgcgcgtgcgcgagtggcaggatatctatacccag
ctgcgccaggtggtgaaggagcttggcctgccgatcaacagcgagccagcggaatatcgc
gagatccataccgcgctgctgaccggtctgctgtcgcacatcggcatgaaggatgctgat
aaacaggagtttaccggggcgcgcaacgcccgcttttccattttcccggggtccggtctg
tttaaaaagccgccgaagtggacgatggtggcggaactggtggagaccagccggctgtgg
ggccgcattgccgcccgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aaacgctcatacagcgagccgcactgggagcgggcgcagggcgcggtgatggcgacggaa
aaggtcaccgtctacggcctgccgatcgtgggcgcgcgtaaggtcaactacagccagatc
gatccggcgctgtgccgcgagctgtttatccgccacgcgctggtggagggcgactggcaa
acgcgccacgccttcttccgggagaacctgaagctgcgggcggaaatcgaagagctggag
cataagtcgcgccgccgcgacattctggtggacgacgagaccctgttcgaattctacgac
cagcgcatcagccacgacgtcatctccgcccgccacttcgacagctggtggaagcaggcc
agcaaagagacgccggatctgctcaactttgagaagagcatgctgattaaggaaggggcg
gagcaggttagcaagctggactatccgaacttctggcatcagggcaaccttaagctgcgg
cttagctatcagtttgagccgggcgccgacgccgacggcgtgacggtgcatattccgctg
ccgctgctgaaccaggtggaggaggccgggtttgaatggcagatccccggcctgcgtcgt
gagctgattatcgcgctgataaaatcgctgccgaagccggtgcggcgcaattttgtcccg
gctcccaactatgcggaagcgtttcttggccgggcgacgccgcttgagctgccgttgctc
gattccctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcactttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgctgaaagaggcgctgaagggcaaagtt
caggagacgctgtcggcggtcgctgatgatggcatcgagcagagcgggctgcatatctgg
agctttggcaccctggcggaaagctatgaacagaagcgcggcaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtggccatcaagctgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgcttaacattccgtcg
ccgattaagtatctgcacgagaaactgccgaacaaagccaagctcgggctctatttcaac
ccgtacggcaaagtgctggatctgattgacgactgcatctcctgcggcgtggataagctt
atcgacgaggcgggcggtccggtatggacggaagagggcttcaaccagctgcacgataaa
gttcgcgccgagctcaacgagacggtggtggagatcgccaaacaggtcgagcagatcctc
actgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggacatcaaagcgcagatggcggggctggtttaccgcggctttgtcaccggc
aacggcttccgtcgtcttggcgatacgctgcgctacctacaggcgattgaaaagcgcctg
gagaagatggctatcgatccgcaccgcgaccgcgcgcagatgctgaaaattgagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctgcgggtgagcttcttcgcccagcagctg
gggaccccgtaccccatctcggacaaacgtgtcctgcaggcgatggagcaggtgacgccg
taa
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