Enterobacteriaceae bacterium S05: CUC76_04275
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Entry
CUC76_04275 CDS
T05725
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebu03016
]
CUC76_04275
Enzymes [BR:
ebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CUC76_04275
Transfer RNA biogenesis [BR:
ebu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUC76_04275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AWB60881
LinkDB
All DBs
Position
850931..852865
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKERESAEPESLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYVESGADGKLLLTVAIADPTAWIAEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGNEAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDEATLQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gttgcggtgatccattctgaaaaagaacgcgaaagcgccgaaccggaatcgctggttgag
cccttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagacgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgcagaaatgcgccgtcatccattaaaaggcgac
cgcggattttacgcggagctgacccagttcatcaccttcagcgacgatcacttcgtcccg
tggtgggtgacgctggcgcgccataatcttgagaaagaggcaccggacggcgtcgccacc
gagatgcttgacgaagggctgactcgccgcgatttgaccgccctcgacttcgtcaccatt
gacagcgccagtaccgaagatatggacgatgcgctgtatgtcgaatctggcgccgatggc
aaactgttgctgacggtggcgatcgctgacccgaccgcgtggattgccgaaggcagcaag
ctggataacgccgcaaaagtacgcgcctttaccaactatctgccaggcttcaacatcccg
atgctgccgcgcgaactgtcagacgacctgtgttccctgcgtgccaatgaagtgcgcccg
gtgctggcctgccggatgaccctggcggccgatggcaccatcgaagacaatatcgagttc
tttgccgctaccatcgaatcaaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagttggcagccgggcaacgaggcgatcgcgcagcaaattacgctgctg
aaggacgtgtgtcagcgccgcagcgaatggcgtcagacccacgcgctggtgtttaaagac
cgcccggattaccgtttcgtcctcggcgaaaaaggcgaagtgctggacatcgtcgcggag
ccgcgtcgtattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaagcttggcttcggcgtttataacgtccacaccggcttcgac
ccggcgaataccgaacagctggcggccctgctgaagacccacgacgtacacgttgatccg
acggaagtgctcaccctggaaggtttctgcaagctgcgccgcgaactggacgctcagccg
accggtttcctcgacagccgcatacgtcgtttccagtcgtttgctgaaatcagcaccgag
ccgggcccccactttggtcttggtcttgaggcctacgccacatggacctcgccgatccgt
aagtatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgaaaccatt
gcgcgcccacaggatgaagccaccttgcagatggcggagcgccgtcgtctcaaccgcatg
gccgaacgcgatgtcgccgactggctgtatgcccgtttcctcaacgataaagccggtacc
gacacccgctttgcggcggagatcatcgacatcagccgcggcggaatgcgcgtacgtctg
gtggacaatggcgcggtcgcctttattccggccccgttcctccacgccgtgcgcgacgaa
ctggtctgcagccaggaaaacggcaccgtgcagatcaagggagaagtggtctacaaggtg
accgatgttatcgatgtcactatcgctgaagtccgcatggaaacgcgtagcatcattgct
cgtccggcagcctga
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