Enterobacteriaceae bacterium S05: CUC76_04345
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Entry
CUC76_04345 CDS
T05725
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebu03032
]
CUC76_04345 (topA)
03400 DNA repair and recombination proteins [BR:
ebu03400
]
CUC76_04345 (topA)
Enzymes [BR:
ebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CUC76_04345 (topA)
DNA replication proteins [BR:
ebu03032
]
Prokaryotic type
DNA Topoisomerases
CUC76_04345 (topA)
DNA repair and recombination proteins [BR:
ebu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUC76_04345 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF2399
MetOD1
LRV_FeS
DUF1722
Motif
Other DBs
NCBI-ProteinID:
AWB60894
LinkDB
All DBs
Position
complement(863898..866495)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSTDSTATKGAKKPK
KDERGALVNRMGVDPWHDWNAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDALPLQVTH
KDDKPFRPVSRDETMAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYISDKFGKKYLPESANQYASKEN
SQEAHEAIRPSDVNVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAGDY
KLKARGRTLRFDGWTKVMPALRKGDEDRTLPLVKQGDQLSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLMNY
DFTAQMEDRLDQVANHQAEWKEVLNHFFGDFTAQLETAEKDPEEGGMQPNPMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV
ASEKEGKATGWSAFFIDGKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgcgatttgccgaccagt
ggatcagcttccaaaaagagcaccgactctaccgccaccaaaggggctaaaaagcctaaa
aaggacgaacgtggtgctctggttaaccgcatgggcgtggacccatggcatgactggaat
gcgcactatgaagtacttccgggtaaagaaaaggtagtttcagaactcaaacagttggcg
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagttatcggcggcgatgaacagcgttacagccgcgtggtgttcaat
gagatcaccaaaaacgccattcgtcaggctttcgaaaagccgggcgaactgaatatcgat
cgggttaacgcccagcaggcgcgtcgctttatggaccgcgtggtgggttatatggtttcg
ccgctgctgtggaaaaaaatcgcccgtggtctttctgccgggcgcgtacagtccgtcgcg
gtccgcctggtggtggagcgtgagcgtgaaatcaaagcattcgtcccggaagagtactgg
gaagttgatgccagcaccaccacgccgggcggcgacgcgctgccgctgcaggtgacccat
aaggacgataagccgttccgtccggtcagccgcgatgagaccatggcggcggtatcgcta
ctggaaaaagccagctacagcgtactggagcgggaagacaagccgaccagcagcaagccg
ggcgcgccgttcatcacctccaccctgcagcaggcggccagcacccgtctcggcttcggc
gtgaaaaagaccatgatgatggctcagcgcctctatgaggcggggcacatcacctatatg
cgtaccgactccaccaacctgagtcaggatgcgctgaacatggttcgcggctacatcagc
gacaagtttggtaaaaaatatctgccggaaagcgcgaatcagtacgccagcaaagaaaac
tcacaagaagcacacgaagcgattcgtccgtctgatgtgaacgtgctggcggaaacgctg
aaagatatggaagcggatgcgcagaagctgtatcagctgatctggcgccagtttgtcgcc
tgtcagatgacgccggcgcagtacgactccacgacgctgaccgtggcggcgggcgattac
aaactgaaagcgcgcggtcgtaccttacgctttgacggctggaccaaagtgatgccggcc
ctgcgcaagggcgatgaggaccggactctgccgctggtcaaacagggcgaccaactgagc
ctggtcgagctgacgcctgcccagcactttaccaaaccgccggctcgcttcagcgaagcc
tcgctggttaaagagctggaaaaacgcggtatcggtcgtccgtccacctatgcctcgatt
atctccaccattcaggatcgtggttacgtgcgagtggaaaaccgtcgtttctacgcggag
aaaatgggcgagatcgtcaccgaccgactggaagagaacttccgcgatttaatgaactac
gacttcaccgcgcagatggaagatcgtctcgatcaggtggctaaccaccaggccgagtgg
aaagaagtgctgaaccacttctttggcgattttaccgcccagctggagacggcggagaaa
gatccggaagagggcggcatgcagccgaacccgatggtgctcaccagtatcgactgtccg
acctgcggccgtaaaatgggcatccgtaccgccagcaccggcgttttcctcggctgttcg
ggctatgccctgtcgccgaaagagcgctgcaaaaccaccattaacctggtgccggaaaac
gaagtcctcaacgtgctggaaggcgatgacgccgaaactaacgcgctgcgcgccaaacgc
cgctgccagaagtgcggtacggcgatggacagctaccttatcgatcccaagcgtaaactg
cacgtctgcggtaacaacccgacctgcgatggctatgagattgaagagggcgagttccgc
atcaagggctatgacggtccggtagtggagtgcgagaagtgcggctccgagatgcacctg
aagatggggcgttttgggaagtacatggcttgtaccaacgacgagtgtaagaatacgcgt
aagatcctgcgcaatggcgaagtggcgccgccgaaggaagatccggtgccgctcccggag
ctgccgtgcgagaagtctgacgcctatttcgtgctgcgtgacggggccgcgggcgtcttc
ctggcggcaaacaccttcccgaaatcacgggaaacgcgtgcgccgctggtggaagagctg
taccgcttccgcgaccgtctgccggaaaaactgcgttatctcgccgatgcgccgcagcag
gatccggaaggcaataagacgctggtgcgctttagccgtaaaacgaagcagcagtatgtg
gcgtccgaaaaagagggcaaagcgaccggctggtcagccttctttatcgacggcaaatgg
acggaagctaaaaagtaa
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