Enterobacteriaceae bacterium S05: CUC76_16240
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Entry
CUC76_16240 CDS
T05725
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ebu
Enterobacteriaceae bacterium S05
Pathway
ebu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUC76_16240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebu03400
]
CUC76_16240
Enzymes [BR:
ebu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CUC76_16240
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CUC76_16240
DNA repair and recombination proteins [BR:
ebu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CUC76_16240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-B_box
zf-C2H2_OTU1_C
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AWB63013
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All DBs
Position
3256935..3257744
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSRDECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRICGTPVVGTKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaccagccgtcgcggcattgagccgcacctggttggc
gccaccattctgcacgccgtcgtgcgcaacggacggttgcgctggccggtttccgaagag
atttatcgcctgagcgacgttccggtgctcagcgtgcgacgtcgcgccaaatatttgctt
ctggaactcccggacggctggatcatcgtccatcttgggatgtcggggagcctgcgcatc
ctgagcgaagagctgcctgcggaaaaacacgatcacgttgatctggttatgagtaacggt
aaagtcctgcgctataccgatccgcgccgctttggcgcctggctatggaccaaagagctg
gaaggccacccggtgctggcgcatctggggccggaaccgctaagcgatgccttcaacgcc
gactatctccagcagaaatgcgcgaagaagaaaaccgcgatcaaaccctggctgatggat
aacaagctggtggtgggcgtcggcaatatctacgccagtgaatcgctgttctccgccggg
atccaccctgacaggctggcgtcctcgctgtcgcgggacgagtgcgagcagttggtgaag
gtgattaagctggtcctgctgcgctcgatagagcagggcggcaccacgctgaaggacttc
ctgcaaagcgatggcaagcctggctattttgcccaggagctacaggtctatggccgcaag
ggcgaaccctgccggatctgcggcacgccggtcgtcgggaccaagcatgcccagcgggcg
accttttattgccgccagtgtcagaaatag
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