Enterobacteriaceae bacterium S05: CUC76_19680
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Entry
CUC76_19680 CDS
T05725
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ebu
Enterobacteriaceae bacterium S05
Pathway
ebu03410
Base excision repair
ebu03430
Mismatch repair
ebu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CUC76_19680
03430 Mismatch repair
CUC76_19680
03440 Homologous recombination
CUC76_19680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebu03400
]
CUC76_19680
DNA repair and recombination proteins [BR:
ebu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CUC76_19680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CUC76_19680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CUC76_19680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AWB63644
LinkDB
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Position
3935624..3937357
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREAVDGVDLPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
VGMLHDAFQKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDNGWFDARGIAAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSSDTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLTAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTS
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaactacgccgccgcgaggcggttgacggcgtcgatttacccgcc
gatctgccgccgctgctgcagcggctgtatgccagccgcggggtgcgcagcgcccaggag
ctggagcgcagcgtcaaaggcatgctcccctggacacagctcaccggcgttgaaaaagcg
gtcgggatgctgcacgacgcattccagaaagggctgcacattgtcgtggtcggcgatttt
gacgccgacggcgccaccagcaccgcgctcagcgtgctggccctgcgcgcgctgggctac
ggcaacgtctcctacctggtgccgaaccgttttgaagacggctacggcttaagcccggaa
gtggtcgatcaggctcacgcccgcggcgcgcagatgatcatgaccgtcgacaatgggatc
tcgtcccatgccggcgtcgatcatgcccatgccctggggatcccggtgctggtgaccgat
caccacctgccgggggagacgctgccggcggcggaggccatcgttaaccctaacctgcgc
gattgcgacttcccatcgaaatcgctggccggggtgggggtggcgttctatctgatgctg
gcgctgcgcacctttctgcgtgataacggctggttcgacgcccgcggcatcgccgcgccg
aaccttgccgagctgctggatttggtggcgcttggcaccgttgccgacgtcgtgccgctg
gatgctaacaaccgtattctcacctggcaggggttaagccgcattcgcgccggtaagtgc
cggcccggcattaaggcgctgctggagattgccaaccgcgatccgcaaaagctggcggcc
agcgacctcggtttcgccctcgggccgcgcctgaacgcggcgggacggctggacgacatg
tcggtcggcgtcgcgctgctgctgtgcgataacatcggcgaagcgcgcgtgttagccaac
gagcttgacgcgctcaaccagacgcgcaaagagatcgagcaggggatgcaggcggaagcg
ttgaccctgtgtcaacagctggaacgcagtagcgacaccctgcccggcgggctggcgatg
taccatccgcagtggcaccagggggtggtcggcatcctcgcctcgcgaattaaggaacgt
ttccaccggccggtgatcgcctttgcgcccaccggcgacggcacgctgaaaggctccggc
cgctccattcaggggctgcatatgcgcgatgcgctggagcgccttgatacgctctatccg
gggctgatcctgaagttcggcggccacgcgatggcggcaggattatcgctggaagaggcg
cgctttgaggagtttcagcagcgcttcggcgagctggtgaccgagtggctggatcccgcg
ctgttgcagggcgaggtggtctccgacggcccgctgacggcggcggagatgagcatggaa
gtagcgcagatgctgcgcgacgccgggccgtggggacagatgttcccggaaccactcttt
gacggccgtttccgtctgctgcagcagcggctggtgggcgagcgtcacctgaaggtgatg
gtcgagccagttgacggcggccccctgctggacggtatcgccttcaacgtggatacttcc
atctggcccgacaacggcgtgcgcgaagtccagttagcctacaagctcgacatcaatgag
ttccgcggcaaccgcagcctgcagctgatcatcgaccacctctggccaaattga
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