Enterobacteriaceae bacterium S05: CUC76_20725
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Entry
CUC76_20725 CDS
T05725
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebu03016
]
CUC76_20725
Enzymes [BR:
ebu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CUC76_20725
Transfer RNA biogenesis [BR:
ebu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CUC76_20725
Prokaryotic type
CUC76_20725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AWB63835
LinkDB
All DBs
Position
4149473..4150522
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AA seq
349 aa
AA seq
DB search
MIAFDQLTWLHGKPQSSGLLKANPEDFLVVEDLGFAPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRK
LRLGALKGNQFTLILREISDRQEVETRLQAIAERGVPNYFGAQRFGIGGSNLQGALRWAE
SGAPVRDRNKRSFWLSAARSALFNQQVSIRLKKTEFNQVVDGDALQLAGRGSWFVVTPEE
LEVSQARVHNRELMITAALPGSGDWGSQRDALAAEQAAIAEETSLQTLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcctttgaccaactgacctggctgcacggcaagccgcagagcagcgggctgctg
aaagccaatccggaagattttctggtagtggaagacctgggctttgccccggacggcgaa
ggcgagcacgtgctggtgcggatccttaaaaacggctgcaatacgcgctttgtcgccgac
gcgctggcgaaattcctcaaaatccatgcccgtgaagtgagcttcgccgggcaaaaagat
aagcacgccgtcaccgagcagtggctgtgcgctcgggtgcccggcaaagagatgccggat
ctgagtaaatttcagcttgagggctgccaggtactggaatatgcccgccataagcgtaag
ctgcgattaggcgcgctgaagggcaaccagtttaccctgatcctgcgcgagattagcgat
cgccaggaggtggagacgcgtctgcaggccatcgctgaacggggcgtgccgaactatttc
ggcgctcagcgcttcggcattggcggcagtaacctgcagggcgcgctgcgctgggcggag
agcggtgcgccggtgcgcgatcgcaataagcgcagtttttggttgtcggcggcccgcagc
gcgttgtttaatcagcaagtcagtattagattaaaaaaaacggaatttaatcaggttgtt
gatggcgatgcgctacaattagcggggcgtgggagctggtttgtcgtcacaccggaagaa
ctcgaggtttcgcaggcgcgggtgcacaaccgcgaactgatgatcacggctgcgctaccg
ggcagcggcgactggggaagccagcgcgacgccctggccgccgagcaggccgccatcgcc
gaggaaacctcgctgcagacactgttggtgcgggagaaagtcgaggcggcgcgccgggcg
atgctcctctatccgcagcagttgagctggaactggtgggatgatgtaaccgttgaactg
cgtttctggctgccggcgggcagcttcgccaccagcgtggtcagggagcttatcaataca
acgggtgactatgcgaatattgctgagtaa
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