Enterobacteriaceae bacterium S05: CUC76_21880
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Entry
CUC76_21880 CDS
T05725
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebu03009
]
CUC76_21880
Enzymes [BR:
ebu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUC76_21880
Ribosome biogenesis [BR:
ebu03009
]
Prokaryotic type
rRNA helicases
CUC76_21880
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SNF2-rel_dom
AAA_22
CMS1
Cas3-like_C_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AWB64037
LinkDB
All DBs
Position
complement(4371197..4372528)
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AA seq
443 aa
AA seq
DB search
MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV
NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDMPRTADIYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYVEEPLKARVIDELRPKTRAPSEKLTGKPSKKVLAKRAEKKEKEKEKPRVKKRHR
DTKNIGKRRKPSAAGTPSAPNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggaggccctccag
gataaaggtttcactcgcccgacagccattcaggccgccgctattccgcctgcgctcgat
ggccgtgacatcctcggttcagcgccgaccggcactggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggcccgccgcgtattctt
atcctgacgccgacccgcgagctggcgatgcaggtggctgaccacgcccgcgagctggca
aagcatacccatctggatattgccaccattaccggcggcgtagcctacatgaaccacgcg
gaagtgttcagcgaaaaccaggacatcgtggtcgccaccactggtcgcctgctgcagtat
ataaaagaagagaacttcgactgccgcgccgtcgagaccctaatcctcgatgaagccgac
cgcatgctggacatgggctttgcgcaggatatcgaaaccatcgccggtgaaacccgctgg
cgcaagcagactatgctgttctccgcgacgctcgaaggcgatgcgatcaaagacttcgcc
gaacgtcttctggaggagccggttgaagtttccgctaacccgtcgactcgcgagcgcaag
aaaatccatcaatggtactaccgcgctgacgatatcgaacataaaaccaaactgctggtg
aatctgctgcaacagccggaagctacccgcgctatcgtctttgtgcgcaagcgcgagcgc
gtgcatgagctggccaactggctgcgtgaagccgggattaacacctgctggctggaaggc
gagatggtgcaggccaagcgtaacgaagccatcaagcgtctgaccgatggccgcgtaaac
gtgctgatcgctaccgacgtcgccgcccgcggtatcgatattccggacgtcagccacgtc
tttaacttcgatatgccgcgcaccgccgacatctatctgcaccgtatcggtcgtaccggg
cgtgcaggtaagaaaggcaccgcgatttcgctggttgaagcgcacgaccacctgttgctg
ggcaagatcggccgctacgttgaagaaccgctgaaagctcgggtgattgatgaattgcga
ccaaaaacccgcgcgccaagcgagaagctgaccggtaaaccatcgaagaaagtgctggcg
aaacgcgccgagaaaaaagagaaagaaaaagaaaagccgcgggtgaaaaagcgccaccgc
gatacgaaaaatatcggtaagcgccggaaaccaagcgcagccgggacgccatcagcgccc
aacgaagagtaa
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