Enterobacteriaceae bacterium S05: CUC76_24955
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Entry
CUC76_24955 CDS
T05725
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ebu
Enterobacteriaceae bacterium S05
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebu03016
]
CUC76_24955
Enzymes [BR:
ebu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CUC76_24955
Transfer RNA biogenesis [BR:
ebu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUC76_24955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWB64577
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All DBs
Position
5011997..5013124
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AA seq
375 aa
AA seq
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MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGRQVSLIDPLTI
TDWAPMRELLLNPDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL
DECRLMQQRRQEVIDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKAREHDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSAEKGVSAELLASRRQINQLLNWHWQLKTQAAEPELISGWRGE
LMAERLKRLLSDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
gccgcctccgccgtcgctctggatacggaatttgtccgtacccgcacctattacccgcag
ctggggctgctgcagctgttcgacggccgccaggtctctctgatcgatcccttgacgatt
accgactgggcgccgatgcgcgagctgctgctcaacccggatgtgaccaaatacctgcat
gccggcagcgaagatttagaagtctttctcaacgcgttcaacctgatgccgcagccgctg
atcgacacccagatcctggcagccttctgcggtcggccgatgtcctggggcttcgcctcg
atggtggaagagtattccggggttgcgctggacaaaagcgaatcccgcaccgactggctg
gcgcgtccgctaaccgagcgtcagtgtgaatatgccgcggccgacgtctggtacctgttg
ccgatcgccagccaattaatggcggagaccgatcgcgcgggctggctatcggcggcactg
gacgaatgccgcctgatgcagcagcgtcgccaggaggtgatcgacccggccgaggcctgg
cgcgatatcggcaacgcctggcagctgcgtacccgccagctgggctgcctgcagctgctg
gcggagtggcgcctgcgcaaagcgcgggagcacgacctggcggtgaactttgtggtgcgg
gaagagcatctgtggagcgtggcacgctatatgcccaccagcctcggcgagctcgacagc
ctcgggttgtccggtagcgaaattcgcttccatggcaaaacgctgattagcctggtcgag
aaagcacaggcgctgccggagtcggccctgccggcgccgctgcagaatctcatcgacatg
ccgggctaccgcaaagcctttaaagatattaaagcgctggtgcaggaagtgagcgctgag
aagggcgtaagcgcggagctgctggcgtcgcgtcggcagatcaaccagctgctgaactgg
cactggcagctgaaaacgcaggccgctgagcctgagctgatttccggttggcgtggtgag
ctgatggccgaacggctgaagaggctgttaagcgactatccgcgctag
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