Empedobacter brevis: F0358_00060
Help
Entry
F0358_00060 CDS
T06196
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebv03016
]
F0358_00060 (truB)
Enzymes [BR:
ebv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F0358_00060 (truB)
Transfer RNA biogenesis [BR:
ebv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F0358_00060 (truB)
Prokaryotic type
F0358_00060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QES91221
LinkDB
All DBs
Position
14459..15169
Genome browser
AA seq
236 aa
AA seq
DB search
MNVEKIQEGHVFLIDKPLDWTSFDVVNKIRWNIRKAYDLKKIKVGHAGTLDPKATGLLLV
CTGKWTKRIDEFQAQEKTYIGTIKLGVTTPTYDLESEEDQTFPTAHLTEEIIQEATNQFI
GEIDQFPPMHSAIKVDGKRLYELARDGQEIERKARRITIHDFKITKINLPFVDFEVNCSK
GTYIRSLAYDFGKAVNSGGYLTALRRTKIGNFDVVDAENLAFERSYFEEENKLEEL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagaaaaaatacaagaaggtcatgtttttttaattgacaagcctcttgactgg
acctcctttgatgtcgtcaacaagattcgttggaacatcagaaaagcatacgatttaaag
aaaataaaagttggacatgcggggactttagatcctaaagcaaccggtttgttattggtt
tgtaccggaaaatggacaaagcgaattgatgaattccaagcgcaagaaaaaacgtatata
ggaacaattaaactaggtgttacaacaccaacgtatgatttagaatctgaggaagatcaa
acttttccaacagcacatttgacagaagaaattatacaagaagctacaaaccaattcatt
ggagaaatagaccaatttcctcctatgcattccgctataaaagtagacggaaaacgtttg
tatgaattagcacgtgatggtcaagaaatagaacgaaaggcacgtagaattacaatccac
gatttcaaaatcacaaaaataaatttgccctttgttgatttcgaagtcaattgtagtaaa
ggaacttatattcgttctttggcatatgattttggaaaagccgtaaactccgggggttat
ttaactgcacttcgccgtacaaaaattggaaactttgatgtcgttgatgctgaaaattta
gcttttgaaagaagttattttgaagaagaaaacaaattagaagaattataa
DBGET
integrated database retrieval system
