Empedobacter brevis: F0358_00435
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Entry
F0358_00435 CDS
T06196
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ebv
Empedobacter brevis
Pathway
ebv03420
Nucleotide excision repair
ebv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0358_00435
03430 Mismatch repair
F0358_00435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_00435
Enzymes [BR:
ebv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0358_00435
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0358_00435
MMR (mismatch excision repair)
Other MMR factors
F0358_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
PriCT_1
Penicillinase_R
UvrD_C_2
AAA_11
RPA_C
Motif
Other DBs
NCBI-ProteinID:
QES91288
LinkDB
All DBs
Position
93068..94885
Genome browser
AA seq
605 aa
AA seq
DB search
MGAFEEIVTCIGTKQSYVVEAGAGAGKTYTLIQTLKHIIQDQGEVLQVKKQEIICITYTN
VAKNEIIKRIEYNDLVSVFTIHEFLWKTIKPYQKQLKIELCKLNEQRLAIDVGKGKESKY
LANLSERVQDIESIFYNDSSFRDFEKGELHHDDVIDLSKMVFENYKLISSIISQKYPYIL
IDEYQDSSEDTITLLVDYLLDRNIGQIVLGFYGDSHQKIYDNGIGDLEKYYNISSPVLKL
IKKEENYRSSLSVVALLNKFRTNIQQVPKKEIDGSITFLYWKAHPIKGEKEKVKDFENSL
KFFKNKFYDDLVSKLKTDGWNFESDSNDKILVLANSRIAERAGFSNLYTVFSKRNSLTVK
DNLLDRNHVLIKIFCGYIDKKTSQERKIGLEHLLDFWNLNNQNEVIRFIRKNGTILNSFK
HENKMEITEILNELSQNRKDKTVKVVLETLIDNGIVFSKNYNDFVTRVNQNLDELEDEKK
ERILKDLTLYNSFLALPYQEVLNFWKHTQNQTVFSTKHGTKGDEYRNVLTVIDDTEWKQE
YNFDNFFNNTEDKPERKLRTRNLFYVECSRAKENLIVLMLSKLSDESLRNIKNWFGEENV
IDITP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatttgaagaaatagttacctgtattggtactaaacaaagttatgttgtagaa
gcaggagcaggagctggtaaaacttatacgcttatacaaacacttaaacatataatccaa
gatcaaggagaagtactacaagttaaaaaacaagaaataatttgtattacatacacaaat
gttgcaaaaaatgaaatcattaagcgtatagaatataatgatttagtatctgtttttaca
atacatgaatttttatggaaaactataaaaccttatcaaaaacagctaaaaatagagtta
tgtaaattgaatgagcaaagattagcaatagatgtaggaaaaggaaaggaatctaaatat
ttagctaatttatctgagcgagttcaagatattgaatctattttttataatgattcttca
tttcgtgattttgaaaaaggagaattacatcatgatgatgttattgatttatctaaaatg
gtttttgaaaattataaattaattagttcaattatatctcaaaaatatccttatatttta
attgatgaatatcaagactcttctgaagatactataacattattggtagattatttatta
gatagaaatattggtcaaattgtacttggtttctatggtgattcacatcaaaaaatctat
gataatggtattggagatttagaaaagtactacaatatatcatctcctgttttaaaacta
attaaaaaagaggaaaactatcgatcatcattaagtgttgtagctctgttaaataagttt
agaaccaatattcaacaagttcccaaaaaagaaatagatggctctattacttttttatat
tggaaagcccatcctattaaaggagaaaaagagaaagttaaagattttgaaaattcttta
aaattttttaaaaataaattttatgacgacttagtatcaaagttaaagactgatggatgg
aactttgaaagtgatagtaatgacaagatattagtcttggctaatagcagaattgctgag
cgtgctggtttttcaaacttatatactgttttctctaaaagaaatagtttaactgttaaa
gataatttattagatagaaatcatgtcttaattaaaatattctgtggatatattgacaaa
aaaacttcacaagaaagaaaaattggattggagcatcttctagatttttggaatctaaat
aatcaaaatgaagtaattcgatttattagaaaaaatggaacaattttgaattcatttaaa
catgaaaataaaatggaaattacagaaattttaaatgaattatctcaaaatagaaaagat
aagactgtaaaagtagtcttggaaactcttattgataatggaatagtattttcaaagaat
tataatgattttgttactagagtaaatcaaaatctagatgaattagaagatgaaaagaaa
gaaagaattctgaaagatctaacgttatataattcattcttagcattaccttatcaagaa
gttttaaatttttggaaacatacacagaaccaaacagtgttttctacgaaacatggcaca
aaaggagatgaatatagaaatgttcttactgttattgatgatactgaatggaaacaagaa
tataattttgataactttttcaataacacagaagataagcctgagagaaaattaagaacc
cgaaatcttttttatgtagaatgttctagggcgaaagaaaatttaattgttttaatgtta
tcaaaattatctgatgaatcactaaggaacattaaaaattggttcggtgaagaaaacgtt
attgatatcaccccctaa
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