Empedobacter brevis: F0358_00810
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Entry
F0358_00810 CDS
T06196
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00300
Lysine biosynthesis
ebv00470
D-Amino acid metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01120
Microbial metabolism in diverse environments
ebv01230
Biosynthesis of amino acids
Module
ebv_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F0358_00810 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F0358_00810 (lysA)
Enzymes [BR:
ebv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F0358_00810 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QES91357
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Position
167669..168880
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AA seq
403 aa
AA seq
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MELNRERLLELVQKYGAPLYVYDANKIKSQYEKMTTAFSTVKRLKLNYACKANTNLNILK
YFKSLGSGLDTVSIQEVELGLMAGFKPKEIIYTPNGVSYAEIKRAIELGVRINIDNLSVL
ETFGQDFPKYPVCVRINPHIMAGGNANISVGHIDSKFGISIHQLPHIKRVVKNTGLHLDG
VHMHTGSDILDIDVFLQGAEILFEVAAEFKNLSYIDFGSGFKVPYYPGADETDIDYLGER
LSERFNEFEKAYGKPLTLMFEPGKYMVSEAGMFLASVNVVKQTTSTVFAGIDTGFNHLIR
PMFYSAHHEIENISNPEGRSRYYTVVGYICETDTFGSNRKINEISEGDVLCFHNAGAYCF
SMASNYNSRFRPAEVLLIDDKDYLIRRRETIQDLIATTEDIKF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaactaaatagagaacgtctattggaactggtgcaaaaatatggtgcacctttatat
gtctatgatgcgaataaaataaaatcgcaatatgaaaagatgacaactgcattttctaca
gtcaaacgtttaaagttaaattatgcatgcaaggcaaatacgaatcttaacatattaaag
tatttcaagtcacttggttcaggattggatactgtttctattcaagaggtagaattagga
ttaatggctggtttcaaaccaaaagaaattatttatacaccaaatggagtttcgtacgca
gaaataaaaagagcaatagaattgggtgttcgtattaacattgataatctttctgtttta
gagacatttgggcaagattttcctaaatatccggtttgtgttcgcatcaacccacatata
atggctggtggaaatgcaaatatttcggtaggacatattgattctaaatttggaatttct
attcatcaattgccccatatcaaacgtgttgttaaaaatacaggattgcacttggatggt
gttcatatgcatacaggttctgatattttggatattgacgttttcttacaaggagctgaa
attttattcgaggttgcggcagaatttaaaaatttatcttacatcgattttggatcaggg
ttcaaagtcccatattatccaggtgcagatgaaacagatatcgactatttaggagaacgt
ttatctgagcgcttcaacgaattcgaaaaggcttatggaaaacctttaaccttaatgttt
gaacccggaaaatatatggtttctgaagccggaatgttcttagcttctgtaaacgtcgta
aaacaaacaacgtctaccgtatttgccggaattgatacaggtttcaatcatttaattcgc
ccaatgttttatagcgctcatcatgaaattgaaaatatttcgaatccggaaggacgtagc
cgttactacacagttgttggatacatttgtgagacagacacatttggttcgaatcgtaaa
ataaatgaaatcagcgaaggtgatgttttatgttttcacaatgccggtgcctattgtttt
tctatggcttctaattacaactctcgtttcagacctgcagaagttttgttaatagacgac
aaagactatttgatccgccgtcgtgaaaccattcaagatttaattgccacaacagaagat
atcaagttctaa
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