| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ebv00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F0358_02510 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ebv03021]
F0358_02510 (rpoC)
03400 DNA repair and recombination proteins [BR:ebv03400]
F0358_02510 (rpoC)
Enzymes [BR:ebv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F0358_02510 (rpoC)
Transcription machinery [BR:ebv03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F0358_02510 (rpoC)
DNA repair and recombination proteins [BR:ebv03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F0358_02510 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(518650..522927)
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| AA seq |
1425 aa
MSTKNKTSQFSKIRIGLASPESILQESKGEVLKPETINYRTHKPERDGLFCERIFGPVKD
YECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERIGHINLVVPIAHIWYFRSLPNKIGYI
LGLPSKKLDMVIYYERYVVIQPGIAKGPEGEELNRLDFLSEEEYLDILETLPIENQYLED
TDPNKFVAKMGAEALEDLLSRINLDELSYELRHKAHNETSKQRRTEALKRLQVVEALRES
NMHHVNRPEWMVMRVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLMEIK
APEVILRNEKRMLQEAVDSLFDNTRKASAVKADGNRPLKSLSDSLKGKQGRFRQNLLGKR
VDYSARSVIVVGPTLKLHECGLPKDMAAELYKPFVVRKLIERGIVKTVKSAKKIIDRKEP
VVWDILENVIKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDGDQM
AVHLPLGPEAVLEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKIRRTDHQFTVK
GEGLTFYSDEEVQIAYNEGAVDLNAPIRVKGTIRVGEELVENQLIETSVGRVLFNQIVPK
QVGFVNEVLTKKSLRTIINKIIKITDFPTTAAFLDDMKQLGYRNAFEGGLSFSLGDILIP
EQKKDLISGAINQVENIKMNYNMGLITNNERYNQVIDVWTTTNATLTEIVMKRMTEDQQG
FNSVFMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGSTGGDIIENPIISNFREGLSILEY
FISSHGARKGLADTALKTADAGYLTRRLVDVAQDVIVMHEDCGTLRGLEVSALKKKEEII
ESLSSRVLGRTSLNDIYNPDNGELIIAAGNIITEDVGEALEAAGIENVEVRSPLTCEAKT
GICAKCYGRNLATGKGVQKGESVGVVAAQSIGEPGTQLTLRTFHVGGTAGNVSEQNTINA
KVDGTVEFDDLRTVESTDDAGNKVDTVVSRSTEMKVIDDLGNVRQQTNIAYGTILSVKNG
AKVQKGQEIASWDPYNGVIIAESTGKIEYEQLEQGVTYQIEIDEQTGFQEKVISESRNKK
LVPALRVITIDGEEKTYNLPVGAHLMVNDGEKINAGKILVKIPRKSAKSGDITGGLPRIT
ELLEARNPSNPAVVCEMDGVVSFGKIKRGNREIIVESKNGEIRRYLVKLSAQILVQENDF
VRAGEPLSDGATTPEDILRILGPTAVQEYLVNEIQDVYRLQGVKIDDKHFEIIVRQMLRK
VRIVDSGDSRFLEDSLEHKDDFMEENDRLFGMKVVEDAGDSDTLKPGQIITVRELRDENS
KLKREDKNLVTAREALPATAEAVLQGITRASLQTKSFMSAASFQETTKVLNEAAVAGKVD
GLVGLKENVIVGHLIPAGTGLKEYQSIIVGSNREYEELINAKQEL |
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| NT seq |
4278 nt +upstreamnt +downstreamnt
atgtcaacaaaaaataaaacaagtcaattctcaaaaattcgtattgggttagcttctccg
gaatcgattcttcaagaatctaaaggtgaagttttaaaacctgaaacgattaactataga
acgcacaaaccagagcgtgacgggttattctgtgagcgtatctttggacctgtaaaagat
tacgaatgtgcctgcggaaaatataaaagaatccgttataaaggtatagtttgtgaccgt
tgtggggttgaagttacagaaaagaaagttcgtcgtgagcgtattggacacatcaacctt
gttgtgccaatcgcacacatttggtatttccgttcattgccaaacaaaattggttacatc
ttaggattaccatctaagaaattagacatggtaatttactacgaaagatatgtagtgatc
caaccaggtattgcaaaaggaccagaaggtgaagaattaaatagattagatttcttatca
gaagaagagtacttggatatcttagaaactcttccgatcgagaatcaatatttagaagat
acagatcctaataagtttgttgcgaaaatgggtgctgaagcattagaggacctattatct
cgtatcaacttagatgaattatcttacgaattaagacacaaagcacataacgaaacatct
aaacaacgtcgtacagaagcgttaaaacgtttacaagttgttgaggcgttacgtgagtca
aatatgcaccacgtaaaccgtccggaatggatggtaatgcgcgttattcctgttattcca
ccagaattgcgtccattagttccattagatggtggtcgttttgcaacatcagatttaaat
gatttataccgtcgtgtgattatccgtaataaccgtttgaaacgattaatggaaatcaaa
gcgccagaagtaatcttacgtaatgaaaaacgtatgttacaagaagcggtagattcgtta
ttcgataatacacgtaaagcatctgctgtaaaagcggatggtaatcgtccgttaaaatca
ttatctgattcattaaaaggtaaacaaggtcgtttccgtcaaaacttattaggtaaacgt
gtagattattctgctcgttcggtaattgttgttggtccaacacttaaattacacgaatgt
ggtttaccaaaagatatggcagctgaattatacaaaccattcgttgttcgtaaattaatc
gaacgtggaattgtaaaaacagttaaatcggctaagaaaattatcgatagaaaagagcca
gttgtttgggatattttagaaaatgtaatcaaaggacatccggttttattaaaccgtgcc
cctacgttacaccgtttaggtatccaagcattccaaccgaaattaatcgaaggtaaagca
attcgtttacacccattagtgtgtacggccttcaatgccgatttcgatggtgaccagatg
gctgttcacttaccattaggaccagaagctgttttagaagcacaattattaatgttagct
tctcaaaatatcttaaaccctgcaaatggttcgccaattactgtaccttctcaggatatg
gttttggggctgtattatatgacaaaaattcgtcgtacagaccaccaatttacagtaaaa
ggagaagggttaactttctattcagacgaagaagttcaaattgcatacaacgaaggagca
gtagatcttaatgcgccaattcgtgtaaagggaacaattcgtgtaggagaggagttagta
gaaaatcaattaatcgaaacttctgtaggacgtgtgttatttaaccaaatcgttccgaaa
caagtgggattcgtaaatgaagtattaacgaaaaaatcgttacgtacaattattaacaaa
atcattaagattacagatttccctacaacggctgctttcttagatgatatgaaacaatta
ggataccgaaatgccttcgagggtggtttatcattctcattaggagatatcttaattcca
gaacaaaagaaagaccttatctctggtgcgatcaaccaagttgagaacatcaagatgaac
tataacatgggtcttattacaaataacgaacgttacaaccaagttattgatgtttggaca
acaacaaacgcaacgttaactgaaattgtaatgaagcgtatgacagaagatcaacaagga
tttaactctgtatttatgatgcttgattctggagcgcgtggatctaaagagcaaattcgt
cagttatcaggtatgcgtggattgatggctaaacctcaaaaagccggttctactggtggg
gatatcatcgaaaacccgattatctctaacttccgtgaaggtctgtctatcttagagtac
tttatttcttcgcacggtgcgcgtaaaggtcttgccgatacggccttaaaaactgccgat
gcaggatacttgactcgtcgtttagttgacgttgcacaagacgttatcgtaatgcacgaa
gattgtggtacattaagaggtttagaagtttcagcacttaagaaaaaagaagaaatcatt
gaaagtttatcttctcgtgtattaggtcgtacttcattaaatgatatttacaacccggat
aatggtgaattaatcatagctgctggaaacattattacagaagatgttggtgaagcttta
gaagctgctggtatcgaaaatgtagaggtgcgttctccattaacttgtgaagcgaaaacc
ggaatctgtgcgaaatgttacggacgtaacttagcaacaggtaaaggtgttcagaaaggt
gaatctgtaggtgtagttgctgcacaatctattggagagcctggtacacagttaacatta
cgtacattccacgttgggggtactgccggtaacgtttctgagcaaaatacaattaatgct
aaagttgacggtacagttgagtttgacgacttacgtactgttgaatctactgatgatgca
ggaaacaaagtagatactgttgtttctcgttctacagagatgaaagtgattgacgattta
ggaaacgttcgtcaacaaactaacatcgcttatggtacaatcttatcagtgaaaaacgga
gctaaagttcaaaaaggacaagagattgcaagttgggacccttataacggggtaatcatc
gcggaatctactggtaaaattgaatacgaacaattagaacaaggtgttacttatcaaatt
gaaattgatgagcaaacaggattccaggaaaaagtaatttctgaatcacgtaataaaaaa
ttagttccggcgttaagagttatcacaattgatggtgaagaaaaaacatacaacttacca
gtaggtgcacacttaatggtaaacgatggtgaaaaaattaatgcaggtaaaatcttagtt
aagattcctcgtaagtctgctaaatcaggcgatattacaggaggtttacctcgtattaca
gagttgttagaggctcgtaatccatcaaatccagctgttgtttgtgaaatggatggagtg
gtatcatttggtaaaattaagcgtggtaaccgtgaaatcatcgttgaatctaaaaatggt
gagattcgtcgttacttagttaaattatctgctcaaattttagttcaggaaaatgacttt
gtacgtgcaggtgaacctttatcagatggagcaactacaccagaggatattttaagaatc
ttaggaccaacagcggttcaagaatacttagtaaacgaaattcaagatgtatatcgttta
caaggggtaaaaattgatgacaaacacttcgaaattatcgtacgtcaaatgttacgtaaa
gttcgtattgttgattcaggagattcaagattcttagaagatagtttagagcacaaagac
gatttcatggaagaaaatgatcgtttatttggaatgaaagtcgtggaagatgctggtgat
tctgatacattgaaaccagggcaaatcatcactgttcgcgagttacgtgacgaaaactct
aaattaaaacgtgaagataaaaacttagtaacagctcgtgaagctttacctgcaacagca
gaggccgttttacaagggattacaagagcgtctttacaaacaaaatctttcatgtctgca
gcatcgttccaggaaacaacaaaagttcttaacgaagcagctgtagctggtaaagtagat
ggtttagtaggattaaaagaaaacgtaattgttggacacttaattcctgcaggaaccgga
ttaaaagaatatcaaagcattatcgtaggatctaaccgtgaatacgaagaattaataaac
gcaaaacaagaattataa |
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