KEGG   Empedobacter brevis: F0358_03435
Entry
F0358_03435       CDS       T06196                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ebv  Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ebv02048]
    F0358_03435
Enzymes [BR:ebv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     F0358_03435
Prokaryotic defense system [BR:ebv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   F0358_03435
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD SduA_N NPHP3_N
Other DBs
NCBI-ProteinID: QES91834
LinkDB
Position
718841..721888
AA seq 1015 aa
MMINPIERLTQNRIIQLFKELGYTYYGNWEERERNSNVEEFYLTSFLKEQGYTESLIKKA
VQETVQLAQTNSGNIYERNKNFYSLLRYGVKAKNNVGEHNETIHLIDWQNWENNHFGIAE
EVTLKGNKTRRPDIVLYINGIALGVLELKRGTVDISESIRQNISNQKEKFNENFFATIQI
ILAGNNTQGLKYGTIETPEKYYLSWKENEQENEGYKLDKYLKKLCNKERLIDIIYNTVVY
DAGRKKLPRPHQYFALKEAQNFIRQNEGGIIWHTQGSGKSILMIIIAKWILENVTNSRVV
LLTDRTELDKQIADNFENMGEQVARTRSGKELMRFLTQSKPRLIASLIHKFGNKGETDYK
TFIEEIKNNPLPIQGNVFVFVDECHRTQSGKLNETMKTILQKAVFIGFTGTPLLKKDKQT
TMDVFGRYIHTYKFNEAVSDGVVKDLVYEGRDIDQNLSSQEKVDAWFEAKTKGLNDFQKS
ELKKRWGTMQNVLSSRSRMEKIVSDILFDFSVKPRLSSEKGNAILVASSIYEACKYYELF
QNTPFKSKCAIITSYNPQTKDITTEDTGEFSETDKEYIYKVYEKVLQNVTAIAGKTQTET
YEDYSKDLFIKQPARMKLLIVVSKLLTGFDAPSCSYIYIDKKMQDHTLFQAICRTNRLDT
DDKDFGYIIDYMGLFGNVTDAIDVYTSELDTENFSKEEVEIQLKDRLMMARERIENALEE
LEAICEPVELPKADLDYIHYFCGNTEIASDLKSNEYKRVALYKAIVSYIRAFANIKSEME
LAGYTQKEIIYFEERLDFYLKLRETIRIASGETLDLKAYEADMRHLIDNYIQASESKVIS
PFEDISLLDLMESDIFTAIDKLPEGIRSNPEAIAETVENAISSKIVEKHLLDPKYFEKMS
QLLFELIEQRKKGALQYKEYLAKAAELIKKVKSGKSDDTPSTIKTIGMRAIYNYLDNNED
LTIACEIAIQYSKKEGFRENIQKQNEIKEAIYEVIKDEIKTEEIYQLVEDNKFDY
NT seq 3048 nt   +upstreamnt  +downstreamnt
ataatgattaatcctattgaacggctaacccagaatcgaattatccaattatttaaagaa
ttaggatatacttattatggcaattgggaagaaagggagcgaaatagtaatgttgaagag
ttttatcttacgtcatttcttaaagagcaaggatatactgaatctttgattaaaaaagct
gttcaggaaaccgttcaattagcacagaccaattctggtaatatttatgagcgtaataaa
aacttttattcattattacgctatggggttaaagcaaaaaataatgtaggagaacacaat
gaaaccatacatctaattgattggcaaaattgggaaaataatcattttggaattgcagaa
gaagttacactaaaaggaaataaaactagaagacccgatattgttttatatataaatggt
attgcgttaggcgttttagaattaaaacgaggtactgtagatatttctgaaagtatcaga
caaaatatttctaaccaaaaagaaaagtttaacgagaattttttcgcaactattcaaatt
atacttgctggaaacaatacacaaggactaaaatacggtactattgaaactccagaaaaa
tattatctatcttggaaagaaaatgaacaagaaaatgaaggatataaattagataagtat
cttaaaaaactatgtaacaaagagcgtttaatagatatcatatacaatacggttgtgtat
gatgcaggaagaaagaaattacctcgcccacatcaatattttgcattaaaagaggctcaa
aacttcatcagacaaaatgaaggaggaataatttggcatacacaaggttctggcaaaagt
atcttaatgataattattgctaaatggattttagaaaatgtgacaaattctcgtgttgta
ctattaaccgatagaactgagctagataaacagattgctgataattttgagaatatgggc
gagcaagtagctcgtacacgctcaggtaaagaattaatgcggtttctaacgcaatctaag
ccacgtttgatagcttcacttatacataaattcggtaataaaggtgaaacggactataag
acatttatagaagaaattaaaaacaatcctttacctatccaaggaaatgtatttgtgttt
gtggatgaatgtcatcgtactcaaagcggtaaactaaacgaaacaatgaaaacaatttta
caaaaagctgtatttattggtttcacaggaactccattactaaaaaaagataagcaaaca
acaatggatgtttttggtagatacattcatacgtataaattcaatgaagcagtttcagac
ggagtggtaaaagacttggtttatgaaggtagagatattgaccaaaatttatcttctcaa
gaaaaggtagatgcttggtttgaggcaaaaacaaaaggattaaatgattttcagaaatct
gagctaaaaaagagatggggaacaatgcaaaatgttttgagctcccgttctcgcatggaa
aaaattgtttctgatatactttttgatttttctgtaaaacctcgcttgtcgtccgagaaa
ggaaatgcaattttagttgcttctagtatttatgaagcttgtaaatattatgagcttttt
caaaataccccattcaaaagtaaatgtgccattattacatcttataatcctcaaactaaa
gatataactacagaagatacaggcgaattttctgaaacagataaagaatatatatataaa
gtttatgaaaaagttttacaaaatgtaactgcgatagcaggtaaaacacaaacagaaact
tacgaagattatagtaaagatttatttataaaacagcctgcgagaatgaaacttcttata
gttgtttctaagcttttgactggttttgatgctccatcatgttcctatatttatatagat
aaaaagatgcaggaccatactttatttcaagcaatatgtagaaccaaccgtttagatact
gatgataaagattttggttatatcattgattatatgggcttgtttggaaatgttacagat
gctattgatgtatatacatcggaattagacactgagaatttttcaaaagaagaagttgaa
attcagttaaaggatcgtcttatgatggctcgtgaacgcatcgagaatgcattggaagag
ttagaagctatttgtgagcctgttgaacttccaaaagccgatttagattatatccattat
ttctgtggtaatactgaaatcgcatcagatttgaaatcaaatgagtataaacgtgtggct
ttatacaaagctatagtttcatatataagagcttttgctaatataaaatcagaaatggag
ctagctggttatactcaaaaagaaatcatttattttgaggagcgactagatttttatttg
aagttaagagaaacaatacgaattgctagtggggaaactttagatttaaaggcttatgaa
gcagatatgcgtcatttaattgataattacattcaagcaagtgaatcaaaagttatatca
ccatttgaggatatatctctattagatttaatggaatctgatatttttacagcgattgat
aaattaccagaaggtatccgttctaatcctgaagccatagcagaaacagttgaaaatgca
attagttctaagatagttgaaaagcatcttttagaccctaagtattttgagaaaatgtca
caattattattcgagttaatagagcaacgtaagaaaggtgcattacaatacaaagagtat
ttagcaaaagctgccgagttaattaaaaaagtgaaatcaggtaaaagtgatgacactcct
tctacaataaaaactattggaatgcgtgccatttataactatttagataataatgaggat
ttaacaattgcttgcgagatagcaatacaatattctaaaaaggaaggatttagggaaaac
attcaaaaacagaacgaaataaaagaagctatttacgaggttataaaagatgaaattaag
actgaagaaatttaccaattagttgaagataacaaatttgattattaa

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