Empedobacter brevis: F0358_03835
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Entry
F0358_03835 CDS
T06196
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F0358_03835 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ebv01007
]
F0358_03835 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebv03016
]
F0358_03835 (serS)
Enzymes [BR:
ebv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
F0358_03835 (serS)
Amino acid related enzymes [BR:
ebv01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
F0358_03835 (serS)
Transfer RNA biogenesis [BR:
ebv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
F0358_03835 (serS)
Prokaryotic type
F0358_03835 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7801
Motif
Other DBs
NCBI-ProteinID:
QES91903
LinkDB
All DBs
Position
807121..808389
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AA seq
422 aa
AA seq
DB search
MLVVSYIQENKDRVIEGLKKRNFKQLDLVDEVLNVDELRRKTQFELDNILAESNKLAKEI
GNLFKDGRSEEANELKNKTVDLKTQSKELQDLLSSYENSVKEILYQIPNIPNELVKAGKD
ADDNEIVFEHGVATAKPNNLPHWEIAKKFDIIDFELGVKITGAGFPVYKGKGARLQRALI
QYFLDKNADAGYTEIVPPFVVNEASGYGTGQLPDKEGQMYYINEDKFYLIPTSEVPVMNI
YRDVVLKAEDLPIAHTAYSPCFRREAGSYGKDVRGLNRLHQFEKVELVRIEKPENSYAAL
DAMVEHVKVLLEELELPYRILRLCGGDTGFTAAITYDFEVFSEAQEKWLEVSSVSNVETF
QANRLKLRYKDENGTQLAHSLNGSALALPRILASILENHQLADGTVRIPKALQPYTRFEV
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagtttcttacattcaagaaaacaaagatcgtgtaattgaaggacttaaaaaa
cgtaacttcaaacaattggatcttgtggatgaagttttaaatgtggatgaacttcgtcgt
aaaactcagtttgaattggataatatattagctgaatccaacaaattagcaaaagaaatt
ggtaatttgtttaaagatggtagatcggaagaggctaatgaattaaaaaacaaaactgtc
gatttaaaaacacaatcgaaagaattacaagatttattatcttcttacgagaactccgtt
aaagagattttatatcaaattccaaatatcccgaatgaacttgttaaagccggtaaagat
gctgatgacaatgaaattgtttttgaacatggagttgcaaccgcaaaaccgaacaattta
cctcattgggaaattgcaaagaaatttgatatcatcgatttcgaattgggtgttaaaatt
accggtgcaggttttcctgtttacaaaggaaaaggtgctcgcttgcaacgcgctttgatt
cagtatttcttagataaaaatgcggatgcaggttacacagaaatcgtacctccgtttgtt
gtaaacgaagcttctggttatggaaccggacagttacccgacaaagaaggacaaatgtat
tatataaatgaagacaagttctacttaattccgacttctgaagttcctgttatgaatata
tacagagatgttgtgctgaaagctgaagatttgcctatcgcccacactgcttattcacca
tgttttcgtcgtgaagccggttcttacggaaaggatgttcgtggtttaaatcgtttacat
caatttgaaaaagtagagttagtacgaattgaaaagcctgaaaattcatatgcagcatta
gatgcaatggtagagcatgtaaaagttttactagaagaattagaattaccttaccgtatc
ttaagattatgtggtggtgatactggatttacagctgccattacatatgattttgaggtt
ttctctgaagctcaggaaaaatggttagaagtttcttcagtctcgaatgttgaaactttt
caagcaaatcgtttaaaattacgttacaaagatgaaaatgggacacaattggctcatagt
ttgaacggttctgctttggctttacctcgtattttagcttctattttagaaaatcatcag
ctagctgatggaacagttagaattccgaaagctttacaaccttatacacgttttgaagtt
ttagattaa
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