Empedobacter brevis: F0358_04340
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Entry
F0358_04340 CDS
T06196
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_04340 (radA)
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
F0358_04340 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
AAA_22
Lon_C
AAA_24
Rad51
AAA_16
AAA_14
NTPase_1
nSTAND3
AAA_18
ATPase_2
DZR
NACHT
DUF7129
AAA_5
DUF7125
RecA
CobU
SLFN-g3_helicase
NB-ARC
ABC_tran
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QES91998
LinkDB
All DBs
Position
914646..916010
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AA seq
454 aa
AA seq
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MAKTKTTYFCQNCGTQTSQWMGQCKSCGEWNTIVEEIVDKGDEKKSWKEKSDKKEKTFAL
NIREINPLGEIRISTKNQELDRVLGGGIVPGSVILVGGEPGVGKSTLMLQVALKLDSIKI
LYVSGEESVSQVKLRAERIGIESDQCFILPETNTQKIFAHAKEIQPQLIVVDSVQTLQTS
YVESSPGSISQIRETTFELIQYAKETNTPIILIGHITKEGVIAGPKILEHMVDVVLQFEG
DRNHIYRILRANKNRFGSTAEIGIYEMQGAGLREVTNPSEVLITKKDELLSGNAIAATLE
GVRPMLIEIQALVSTAVYGTPQRTATGFDAKRLNMLLAVLEKRAGFRLNMKDVFLNITGG
IRVDDPAIDLAVIAAILSSSEDSAVPDNCCFAGEVGLSGEIRAVNRVEQRITEAEKLGFD
VIFVSKYNKIKDTDYGIRIVRISKVEDLYRMLFQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacaaaaacgacctatttctgccaaaactgtggcacgcaaacctctcaatgg
atgggacaatgcaaaagttgtggcgaatggaataccattgtggaagaaattgtggacaaa
ggcgacgaaaaaaaatcgtggaaagaaaaatcggacaaaaaagagaaaacttttgcactg
aatattcgcgaaataaatccgttgggagaaattagaatttcgacaaaaaaccaagaatta
gacagagttttaggcggcggaattgttcctggatcggtgattttggttggtggtgaacca
ggtgttggaaaatcgacgctaatgttgcaagttgccttaaaattagattcgattaaaatc
ttatatgtttccggggaagaatctgtttctcaagtaaagcttcgtgcggagcgaattgga
atagaatcagatcaatgttttattttacctgaaaccaatacacagaaaatttttgctcac
gccaaagaaattcaacctcagctcattgttgtcgactcggtacaaacgcttcaaacttct
tatgttgaatcatctccaggaagtatttctcagatccgtgaaacaacttttgaattaatt
caatatgcaaaagaaaccaatactccgattattctaattggtcatattacgaaggaaggt
gtcattgcaggaccaaaaattttggaacatatggtggatgttgtattgcaatttgaagga
gaccgcaatcatatttaccgtattttgagagcgaacaaaaaccgatttggttcgactgca
gaaattggaatttatgaaatgcaaggtgccggattgagagaagtgaccaatccgtccgaa
gtattaatcactaaaaaggatgaattgctaagcggaaatgcaattgcggcaactctcgaa
ggcgttcgtccaatgttaattgaaattcaggcattggtctctacagcggtttacggaact
ccacaacgtaccgcaacaggatttgatgcaaaacgactgaatatgctactggctgttttg
gagaaacgggcaggtttccgattaaacatgaaagatgttttcctgaatattaccggagga
atccgtgtagatgaccctgcaattgatttagctgtaattgcggcgatcctttcttcgagt
gaagattctgctgttccggataattgctgctttgccggtgaagtaggtttaagtggagag
attagagctgttaaccgtgttgagcagcgaattacagaagccgaaaaattaggttttgat
gttattttcgtttcaaaatacaacaaaataaaggatacagattacggaattagaattgtt
cgtatttcaaaggtagaagatttgtatcgaatgttatttcaatag
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