KEGG   Empedobacter brevis: F0358_05515
Entry
F0358_05515       CDS       T06196                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ebv  Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ebv03032]
    F0358_05515
   03036 Chromosome and associated proteins [BR:ebv03036]
    F0358_05515
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ebv02048]
    F0358_05515
Enzymes [BR:ebv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     F0358_05515
DNA replication proteins [BR:ebv03032]
 Prokaryotic type
  DNA Topoisomerases
   F0358_05515
Chromosome and associated proteins [BR:ebv03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    F0358_05515
Prokaryotic defense system [BR:ebv02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    F0358_05515
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C WI12
Other DBs
NCBI-ProteinID: QES92218
LinkDB
Position
1163699..1165549
AA seq 616 aa
MSEIDQQVNYTEDNIKTLDWREHIRMRPGMYIGKLGDGSSQDDGIYILLKEIVDNCIDEF
VMGAGKTIEINLREDEVTVRDYGRGIPLGKMVDAVSKMNTGGKYDSQAFKKSVGLNGVGT
KAVNALSTSFRVQSIRDGKTRIAEFEQGILKAQEDEKETSLRKGTKITFVPDKSIFLNFK
FRKEYVDKMLKNYVYLNPGLKIIFNGEEFFSKDGLKDLLKDNIEEETIYDIIHLKGEDIE
IAMTHSSKSYSETYYSFVNGQNTTQGGTHLTAFKEAVVKTVREFYNKNYDPADIRKSIIG
AISIKVIEPVFESQTKTKLGSNEIGPGMTTVRTFVNDFIKTNLDNFLHKNTEVAQALERK
IKQSETERKELSGIRKLARDRAKKVSLHNKKLRDCRQHYNDPKAELRLDTTIFITEGDSA
SGSITKSRSVETQAVFSLRGKPLNSYGLTKKIVYENEEFNLLQAALNIEEGLEDLRYNNV
VIATDADVDGMHIRLLIITFFLQFFPELIKEGHLYILQTPLFRVRNKKETRYCYSEAERI
KALEEIKNPEITRFKGLGEISPDEFKHFIGKDIRLEPVMIGKDQTIDSLLEFYMGKNTPT
RQEFIINNLAIEAIKN
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtcagaaatagatcaacaggtaaattatacagaagacaatatcaaaacacttgattgg
cgcgaacatattcgcatgcgaccagggatgtatattgggaagctgggagatggttcgtct
caggatgatgggatttatattttgttgaaagagattgtggataactgtatcgatgaattt
gtgatgggtgcagggaaaacaatcgaaataaatctgcgcgaagatgaagtgacggttcgt
gattatggtcgtggtattccgctagggaaaatggtagacgctgtttctaagatgaatacg
ggtggtaaatacgattcacaagcgttcaaaaaatcagttggactgaatggggttggtacc
aaggcggtgaacgcattgtcaacttcttttcgggtgcaatcaatccgagatggaaaaacg
cgtatagctgaatttgagcaagggattttaaaagctcaagaagatgaaaaagaaacttct
ttgagaaaagggactaaaattacatttgttccggataaatcaattttcttaaattttaaa
ttcagaaaagaatatgtagacaaaatgttgaaaaactatgtttacttaaatccgggatta
aaaatcattttcaatggagaagaattcttttcaaaagacggattaaaagatttattgaaa
gataatatagaggaagaaacgatttacgacattatccatttgaaaggagaggacattgaa
atcgcgatgacacatagttctaaatcctattcggaaacctattattcttttgtgaatgga
caaaatacaacgcagggagggacacatttaacagcttttaaagaggcagtagtgaaaact
gttcgcgaattttataataaaaattatgatcctgcggatattagaaaatcaatcattggt
gcaatttcaattaaagtgattgaacctgttttcgaatctcaaacaaaaacaaaacttggt
tccaacgaaattggaccggggatgacaacggttcgtacgtttgtaaacgattttatcaaa
accaacctcgataactttttacataaaaatacagaggttgcacaagctctggaacgtaag
ataaagcaatctgaaacagaaaggaaagagctttccgggatacgaaaattagcacgtgat
cgtgcgaaaaaagtgagtttacacaataagaagctgcgtgattgtcgtcaacattacaat
gatccaaaagctgaattgcgcttggatactacaatttttattaccgagggagattctgcc
agtggatcgatcacaaaaagcagaagtgttgaaacgcaagcggtatttagtttgagagga
aagcctttgaattcgtatggtttaacaaagaaaatcgtgtacgaaaatgaagaatttaac
cttttgcaggcggctctaaatattgaagaaggattagaggatttgcgttacaataatgtg
gtgattgcaactgatgccgatgtagacgggatgcacattcgtttattgattattacgttt
ttcttacaattttttccggaattgataaaagaagggcatttgtatattttgcaaacacca
cttttccgtgtaagaaacaaaaaggagacacgttattgttattctgaagcagaaagaata
aaagcattggaagaaatcaaaaatcctgaaattacacgattcaaaggattaggagaaatt
tctccggacgagtttaagcactttattgggaaagatattcgattggaaccggttatgatt
ggaaaagatcaaacaattgatagtcttttagaattttatatgggaaaaaatactccgaca
agacaagaatttattattaacaacttggcgatagaagccataaaaaactaa

DBGET integrated database retrieval system