Empedobacter brevis: F0358_06730
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Entry
F0358_06730 CDS
T06196
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00260
Glycine, serine and threonine metabolism
ebv00460
Cyanoamino acid metabolism
ebv00630
Glyoxylate and dicarboxylate metabolism
ebv00670
One carbon pool by folate
ebv00680
Methane metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01120
Microbial metabolism in diverse environments
ebv01200
Carbon metabolism
ebv01230
Biosynthesis of amino acids
ebv01240
Biosynthesis of cofactors
ebv04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F0358_06730
09102 Energy metabolism
00680 Methane metabolism
F0358_06730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F0358_06730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F0358_06730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F0358_06730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F0358_06730
Enzymes [BR:
ebv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F0358_06730
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Peptidase_M26_C
Motif
Other DBs
NCBI-ProteinID:
QES92434
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Position
complement(1450562..1451836)
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AA seq
424 aa
AA seq
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MAHDVIFDLIEEEKERQLNGIELIASENFVSDNVMRAMGSVLTNKYAEGYPGKRYYGGCE
VVDEVETIAIERLKALFNAEYANVQPHSGSQANAAVYLACLKPGDKILGFDLSHGGHLTH
GSPVNFSGLTYQTSFYGVDKETGRIDYEAMAETARKEKPQMIICGASAYSRDIDYAKFRE
VADEVGALLLADISHPAGLIARGILNDPMPHCHIVTTTTHKTLRGPRGGVIMMGKDFENP
WGAKTPKGEIKMMSQILNGAVFPGTQGGPLEHVIASKAVAFEEALSDGYMDYIVQVVKNA
KALAAALVAKGYDIVSGGTDNHCMLIDLRNKGISGKQAENALVLAEITCNKNMVPFDDKS
PFVTSGIRLGTAAITTRGLVETDMQTVADLIDEVLMNIDNEEVIDGVADRVNDFMSSRPL
FQMK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgatgtaatcttcgatttgattgaagaagaaaaagaaagacaattaaacgga
attgaattaatcgcgtcagaaaactttgtttctgacaatgtaatgcgcgcgatgggttct
gttttaacaaataaatatgcagaaggttacccaggaaaacgttactacggaggttgtgaa
gtagtagatgaagtagaaacgattgctattgagcgtttgaaagctttattcaacgcagaa
tatgcaaacgtacaaccacattcaggttctcaagcaaatgctgcagtttatttggcttgt
ttaaaaccgggagataaaatcttaggattcgatttatcacatggtgggcatttaacacac
ggttctcctgttaatttttcgggcttaacgtatcaaacttctttctacggtgtagataaa
gaaaccggacgtatcgattacgaagcaatggctgaaactgcacgtaaagaaaaacctcaa
atgattatttgtggtgcttctgcttattctcgcgacatcgattatgctaaattccgtgaa
gtggcagacgaagtgggcgctttattattggccgatatctctcatcctgccggattgatt
gctcgtggaattttaaacgatccgatgcctcattgtcatatcgtgacaacaacaacacac
aaaactttacgtggacctcgcggcggagtaattatgatgggaaaagattttgaaaatcct
tggggagcaaaaacacctaaaggagaaataaaaatgatgtctcaaattttgaacggtgct
gttttcccgggaacacaaggtggtcctttagaacatgtaattgcatctaaagcggttgca
tttgaagaagctttgtctgacggttacatggattatatcgtacaagttgtaaaaaatgca
aaagctttggctgctgccttagtggcaaaaggttacgatattgtttcgggaggaacagac
aatcactgtatgttaatcgatttacgtaacaaaggaatttctggaaaacaggcggaaaat
gcattggtattagcggaaattacatgcaacaaaaacatggttccttttgatgacaaatca
cctttcgttacatctggtattcgtttaggaactgctgctatcacaacaagaggtttagtt
gaaaccgatatgcagacagttgcagatttgattgacgaagttttaatgaacatcgataat
gaagaagttattgacggagttgcagatcgtgtaaacgactttatgtcttctcgacctttg
tttcaaatgaaataa
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