Empedobacter brevis: F0358_07040
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Entry
F0358_07040 CDS
T06196
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ebv
Empedobacter brevis
Pathway
ebv03030
DNA replication
ebv03410
Base excision repair
ebv03420
Nucleotide excision repair
ebv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0358_07040 (polA)
03410 Base excision repair
F0358_07040 (polA)
03420 Nucleotide excision repair
F0358_07040 (polA)
03440 Homologous recombination
F0358_07040 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebv03032
]
F0358_07040 (polA)
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_07040 (polA)
Enzymes [BR:
ebv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0358_07040 (polA)
DNA replication proteins [BR:
ebv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F0358_07040 (polA)
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F0358_07040 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0358_07040 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QES92488
LinkDB
All DBs
Position
1520711..1523542
Genome browser
AA seq
943 aa
AA seq
DB search
MNQLDKRLFLLDAYALIFRGYYAFIKNPRINSKGFNTSAIMGFANSLFDVIRREQPTHLA
VVFDVGEATVRTVDYAEYKANRDETPEAIRQGVPYIQEILRALKIPVLFAEGYEADDVIG
TLAQKAEKEGFTTYMVTPDKDFAQLVTDKIKIYRPAANGKGVEIWGIDEVKEKFDIDSPS
QVIDYLGMMGDAVDNIPGLPGVGAKTASKYLKEFGSLEGLLANTDKLKGKAKEKIEENKE
LGILSKRLATILTDAPVEFDEEDLTVCPPDIDKVTELFTELEFRRMLETVYRIYGLDASG
IIKEAQEEISIASQVSSNQSAQQSLFDFTSEEESVPQNSVFTNISTTSHLYQLIDTKKGR
EILLKNILKQKEVTFDTETTSLDALQAELVGISFSWEKGKGYYVPFSADFEETKQMINEF
QPFFEDESISKIGQNLKYDIKVLDKYNIVVKGRNFDTMIAHYLINPDMRHNMDVLAETYL
SYQPVSIESLIGKKGKNQKNFRDVPLMEQAEYGVEDSDITNQLKNLFEPELQKANTYKLF
TDLEMPLMQVLADMELEGVNLDVPFLKELSVRHEVKLRELEAKIQQDAGEEFNLNSPKQL
GDILFDKLKLDPKAKKTKTGQYATGEEILSKLKDKHPIINDILAYRQLQKLKSTYIDALP
ELVNPKTGRVHTTYAQTVAATGRLSSVNPNLQNIPIRSEEGQQIRKAFVARDENHVLISA
DYSQIELRLIAQMSQDPIMVEAFKHGEDIHASTASKVFNVALDEVTREQRSQAKTVNFGI
IYGVSSFGLAEQANISRKEAKALIDAYYETYPTLKAYIEKQVELAREQGFVETLMGRRRY
LKDINSRNAVVRSHAERNAVNAPIQGTAADIVKMAMIQIQKELKKNYKTKMILQVHDELI
FDAPKDEVEKVAELIKTTMEASMQMDVPLIAEVGVGANWLEAH
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattagataaaagacttttcttgttagatgcttatgccttgatttttagagga
tattatgcatttatcaaaaatccaagaatcaactcaaaaggatttaacacatcagcaatt
atgggatttgcaaattcattgtttgatgtgattcgccgtgaacaaccaactcatttagct
gtggtatttgatgttggagaagcaacggttcgtacagttgattatgctgaatataaagcg
aatcgggatgaaacacccgaagcaattcgccaaggtgttccgtatatccaagaaattttg
agagccttaaaaattccggttctttttgcagaaggttacgaagctgatgatgtgatcgga
acgttggcccagaaagcagaaaaagaaggttttaccacttatatggtgactcctgataag
gattttgcccagttggttaccgataaaattaaaatttatcgacctgcggcaaatggaaaa
ggagttgaaatctggggaatagatgaggtcaaagagaaatttgacattgacagcccaagt
caagtgatagattatcttgggatgatgggagatgcagtggataatattccgggtttgcca
ggagttggagctaaaactgcaagtaaatatttaaaagagtttggctcgttggaaggactt
ttagccaatacagataagctaaaaggaaaagccaaagaaaagattgaagaaaataaagaa
cttggaattttatcaaaaagattagccacaattttgacggacgctcctgttgaatttgat
gaagaagacttaacagtttgccctcctgatattgataaagttacggaactgtttacggag
ttagaattccgtagaatgctggaaaccgtttatagaatttatggtttagatgcttcaggt
attatcaaagaagcgcaggaagaaatttctatcgcaagccaggtaagttctaatcaatca
gcgcaacaaagtttattcgattttacttcagaagaagagagtgtgcctcaaaattctgtt
tttacaaatatttcaacgacaagtcatttgtatcaattgattgatacaaaaaaaggccgc
gaaattttactgaaaaatatactgaaacaaaaggaagttacgttcgatacagaaacaact
tctctggatgcgttgcaagcagaattggtcggaatttcattttcttgggaaaaaggaaaa
ggttattatgttcctttttctgctgattttgaagaaacaaagcaaatgatcaatgagttt
caaccattttttgaagatgagtcaatttcaaaaattggacaaaatctaaaatatgatatc
aaagtattggataaatataacattgttgtaaaaggtcgaaattttgataccatgattgcg
cattatttgattaatccggatatgcgccacaatatggatgtattagctgaaacatatttg
agctaccaacctgtttcgattgaaagtctgattggaaaaaaaggaaagaatcaaaagaat
ttcagagatgtcccattaatggagcaggcagaatatggtgtggaagattctgatattaca
aatcagttgaaaaatcttttcgaaccggaattacaaaaagcaaatacatataaattattt
accgatttagaaatgccattgatgcaggttttagcagacatggaattggaaggggttaat
ttggatgttccgtttctgaaagaactttctgtaagacatgaagtaaaattaagggaatta
gaagcgaaaattcagcaagatgccggagaagaatttaatttgaattcaccaaaacaattg
ggtgatattttatttgataaattaaaattagatccgaaagcaaaaaagacaaaaacaggt
caatatgcaacaggagaagaaattttatcaaaattgaaggataaacatcctattatcaat
gatatcttagcgtatcgccaattacagaaattaaagtcaacttatatcgatgcattaccg
gagttggtgaacccaaaaacagggcgtgtccatacgacttatgcccaaacagttgccgca
accggacgtttgtcatctgttaatcccaatttacaaaatatcccgattcgttctgaagaa
gggcagcaaatccgtaaagcttttgttgcgagagatgaaaaccatgtgttgatttctgcc
gattattctcaaatcgaattacgtttgattgcacagatgtctcaggatccgataatggtt
gaagcttttaaacatggcgaagatattcatgcttctacagcatctaaggtttttaatgtt
gctttagatgaagtgacacgtgaacaacgtagtcaggctaaaacggtgaacttcggtatc
atttatggtgtttcatcattcggattggcagagcaagccaatatttcgagaaaagaagct
aaagcattgattgatgcatattacgaaacttatccgacgttaaaagcatatattgaaaag
caagtagaacttgcacgtgaacaaggttttgtagaaacgttgatgggacgacgccgttat
ttaaaagatattaattcgagaaatgccgttgttcgctcgcatgcagaacgtaatgctgtt
aatgcaccgatacaaggaactgcggcggatattgtaaaaatggcaatgatccagattcag
aaagaattgaagaaaaattataaaaccaaaatgattttgcaggtgcatgatgaattaatt
tttgatgcaccgaaagatgaggtagaaaaagtagctgaattaatcaaaacaacaatggaa
gcgtctatgcagatggatgttccgttgattgcagaagttggggttggcgcgaattggtta
gaagcgcattaa
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