Empedobacter brevis: F0358_07075
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Entry
F0358_07075 CDS
T06196
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ebv
Empedobacter brevis
Pathway
ebv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0358_07075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebv03019
]
F0358_07075 (recQ)
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_07075 (recQ)
Enzymes [BR:
ebv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0358_07075 (recQ)
Messenger RNA biogenesis [BR:
ebv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0358_07075 (recQ)
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0358_07075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
QES92495
LinkDB
All DBs
Position
complement(1532272..1534473)
Genome browser
AA seq
733 aa
AA seq
DB search
MEATSKNLTSYLKKYFGFDQFKGQQHEIITSLLNKEDVFVLMPTGGGKSLCYQLPALMSD
GVAIIVSPLIALMKNQVDAIRGISENNGIAHVLNSSLNKSETKAVMTDIKDGVTKMLYVA
PESLTKEEYIDFFKSVKISFFAIDEAHCISEWGHDFRPEYRNLKSIINKIGDAPIIALTA
TATPKVQEDIQKTLGMQSAKVFKDSFNRTNLFYEIRPKVDQDKQIIKFIKQNEGKSGVIY
CLSRKKVEEITQLLQVNGINAIPYHAGLDAKTRSKHQDMFLMEDASVVVATIAFGMGIDK
PDVRFVMHYDMPKSLESYYQETGRAGRDGGEGICIAFYDYKDIEKLEKFLASKPVAEREV
GMQLLSEVVAYAETSMSRRKFLLHYFGEEFDDKNGEGANMDDNMRNPKKMIEAKDDAVAA
LQVIQKTNQKLKLNDVVNVLVGKETSITKSYNLSSEDFFGIGKAKEDYYWKSILRQLIVR
NLLEKEIESYGILKITKEGQDFINKPSSFEIAEDIDFKKLLSEGSFDKEETSSAPVAFDD
ILLKQLKDLRKKISKKHQIPPFAVFQDSSLDDMTMQYPTTVKELTNVFGVGEGKAQKFGK
EFVDFIAQYVKDNDITRPEDMVIKQVADKSSHKVYIIQSTDRKLNLEDVAEAKNMTMSDL
LSEMESIVYQGTKLNINYYIDEVLDEDQQEEIYEFLMESDSDSMSALLEEFGDDYDDEEL
RLMRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacttcgaaaaacttaacatcttacctaaaaaaatattttggtttcgaccaa
tttaaaggacagcagcacgaaatcattacaagcttacttaataaagaagatgtatttgtt
ttgatgcctactggcggaggtaagtctttatgttatcaactaccggcattaatgtcagat
ggagtcgcgattattgtttcacctttaatcgccttaatgaagaatcaagtagacgctata
cgtggaatttctgaaaataatggaattgcccacgtattaaactcatctttaaataagtca
gaaacgaaagcagtaatgactgacattaaagatggggtaacaaaaatgctatatgttgca
cctgaatctttaacaaaagaagaatacatcgatttctttaaatcagtgaaaatttctttt
tttgcaattgatgaagcgcattgtatttctgaatggggacacgattttcgtccggaatat
cgcaacctgaaatccattatcaataaaattggtgatgcccctattattgctttaacagca
acagcaacccctaaagtacaagaagatattcagaaaactttaggtatgcaaagtgcaaaa
gtatttaaggattcatttaatcgtaccaatctattttacgaaatccgcccaaaggttgat
caagacaaacaaatcatcaaatttatcaaacaaaacgagggtaaatctggggtaatttat
tgtttaagtcgtaaaaaagttgaagaaattactcaactgttacaagtaaacggcatcaat
gctattccttatcatgctggtttagatgccaaaacccgtagcaaacatcaagatatgttt
ttgatggaagatgcaagtgttgtggttgcaacgattgctttcggaatgggaatcgataag
cctgacgtgcgttttgttatgcattatgatatgccaaaatcgttagaaagttattaccaa
gaaaccggtcgtgctggtcgcgacggaggcgaaggtatttgtatcgctttctatgattac
aaagatatcgaaaaattagaaaaatttttagcaagtaaacctgtcgctgaacgcgaagtt
ggtatgcaattactttctgaagttgtcgcttatgcagaaacttctatgtctcgccgcaaa
ttcttattacattattttggagaagaatttgacgataaaaatggagaaggtgcaaacatg
gatgacaatatgcgcaatcctaaaaaaatgattgaagcaaaagatgatgctgtcgctgct
ttgcaggttattcaaaaaacaaatcaaaaattaaaattaaatgatgtcgtaaatgttttg
gttggcaaagaaacatctattacaaaatcgtataatttaagctcagaagattttttcgga
atagggaaagcaaaagaagattattactggaaatctattttacgtcaattaattgttcgc
aatttattagaaaaagaaattgaatcttatggtattttaaaaatcaccaaagaaggacaa
gatttcatcaataaaccttcctcttttgaaatagcagaagatattgatttcaaaaaatta
ttatcagaaggtagcttcgacaaagaagaaacttcatcagcgccagttgcttttgatgat
atcttgctaaaacaactaaaagatttacgtaaaaaaatctctaaaaagcatcaaattcct
ccatttgcagttttccaagattcgagcttggatgacatgacgatgcaatacccaacgacc
gttaaagaattaacaaatgtctttggtgtcggagaaggtaaagctcagaaatttggaaaa
gaatttgttgattttattgcacaatacgtaaaagacaatgatatcacccgtcctgaagat
atggtaattaaacaagtcgctgataagtcaagccacaaagtttacattattcaatcgaca
gatagaaaattgaatttagaagatgttgctgaagcaaaaaatatgacgatgagtgattta
ctttcagaaatggaaagtatcgtttatcaaggaacaaaattaaatatcaattattacatt
gacgaagtattagatgaggatcaacaagaagaaatttatgaattcttgatggaatctgac
tcggattcaatgtcggcattattggaagaatttggtgatgattatgatgatgaagaattg
cgtttgatgcgtatcaaattcatcagtgaagtcgcaaattaa
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