Empedobacter brevis: F0358_07175
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Entry
F0358_07175 CDS
T06196
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebv03032
]
F0358_07175 (gyrB)
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_07175 (gyrB)
Enzymes [BR:
ebv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F0358_07175 (gyrB)
DNA replication proteins [BR:
ebv03032
]
Prokaryotic type
DNA Topoisomerases
F0358_07175 (gyrB)
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F0358_07175 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
QES92514
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All DBs
Position
1552323..1554266
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AA seq
647 aa
AA seq
DB search
MSNNTYTADNIQALEGMEHVRLRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTIK
VTILEGNSIRVEDNGRGIPIDLHKKEGKSALEVVMTKIGAGGKFDKDTYKVSGGLHGVGV
SCVNALSNHLSAEVFKNGKQYIQEYSKGKPLYDVKEVGTTEKNGTTVTFTPDDTIFQEVQ
TYNYQTLANRLRELAFLNKGINITLIDEREKDADGNSITETFHSEEGLKEFVEFIDGSRE
SIMDKVIFMEGERDGIPVEVAMRYNTSYNENVHSYVNNINTHEGGTHLSGFRRALTRTLK
KYAEENFNLAKEKVEIVGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSPAVDKIVA
EMLTNFLEENPTEAKQIVDKVILAAKARQAAKKAREMVQRKNPMGGSGLPGKLADCSSRK
PEESELFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKAMAHKVLDNEEIKNIYTAL
GVTIGTEEDSKALNISKLRYHKVVIMTDADVDGSHIATLILTFFFRYMKELIEQGHIYIA
TPPLYLIKKGAKAEYAWNEKERERLTAEFSADGSGKGVTIQRYKGLGEMNAEQLWDTTLN
PEHRTLRKVTIDNATEADRVFSMLMGDDVPPRREFIEKNAHYAKIDV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacacatatacggcggataatatccaagcgttagaaggaatggagcatgta
cgtcttcgtccctcaatgtacattggagacgtcggagttagaggactgcaccacttagtt
tacgaggttgttgataactctattgatgaagctttagcaggatactgtgatacaatcaaa
gtaacaattttagaaggaaactcgatccgtgtagaagataacgggcgtggtattcctatc
gatttacataaaaaagaagggaaatctgcattagaagttgtaatgactaaaatcggtgca
ggaggtaagtttgacaaagatacatacaaagtttccggaggtctgcatggtgttggagtt
tcttgtgttaatgcactttctaaccatttgtcagcagaagttttcaaaaatgggaaacaa
tatattcaagagtattctaaaggaaaacctttgtatgatgtaaaggaagttgggacaact
gaaaaaaatggaacaacagttacttttactccagatgatactattttccaggaagtacaa
acatacaactatcaaacattagccaatcgtttgcgcgagttagctttcttaaataaagga
attaacatcacattaattgatgagcgcgaaaaagatgccgatggaaattctattacagag
acatttcattcagaagaagggttaaaagaatttgtagagtttattgacggcagtcgcgaa
tctatcatggataaagtaatcttcatggaaggtgaacgtgatggaattccggttgaggtt
gcaatgcgatacaatacgtcatataatgaaaatgtacattcttatgtcaataacatcaat
acacacgaaggaggaacacatttatcaggtttccgccgtgcattgacacgtacattgaaa
aaatatgccgaagaaaattttaatcttgcaaaagaaaaagttgagattgttggtgacgac
ttccgtgaggggttaacagctgtgatttcggtaaaagtaatggaacctcaattcgaaggt
caaacaaaaacgaaattaggaaattctgaagtttctcctgcagttgataaaattgtagct
gaaatgttgacaaatttcttagaagaaaatccaactgaggcaaaacaaattgttgacaaa
gtaattttagcagcaaaagcgcgtcaggcagcgaagaaggcacgtgaaatggtacaacgt
aaaaacccaatgggtggaagtggtttaccagggaaattagcggattgttcatctcgaaaa
ccagaagaatcagaattatttttagtcgagggagattctgccggaggaacggcaaaacaa
ggtcgtgaccgtcattttcaagcgattttaccattgcgtggtaagattttgaatgtagaa
aaggcaatggcacacaaagtcttggataacgaagagattaaaaatatctatactgcattg
ggagtaacaataggaacagaagaagattcaaaagcgctgaatatttcaaagttacgttac
cacaaagttgtaattatgaccgatgccgatgtcgacggttctcacatcgcaacattaatt
ttgacattcttcttccgctacatgaaagaattgattgagcaagggcatatttatattgcg
acaccacctttatatttaatcaaaaaaggagcgaaagctgaatatgcttggaatgaaaaa
gaacgtgaaagattaacggcagaattttcagcggatggttcaggaaaaggtgttacaatt
cagcgatacaaaggtcttggggaaatgaacgcagagcaattgtgggatacaacgcttaat
ccggaacatagaacgttacgtaaagtaacgatagataatgcgacagaagcagatcgtgtt
ttctctatgttgatgggagatgatgttccgccacgtcgtgagtttatcgagaaaaatgca
cattacgctaaaattgatgtgtaa
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