Empedobacter brevis: F0358_07275
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Entry
F0358_07275 CDS
T06196
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00740
Riboflavin metabolism
ebv00790
Folate biosynthesis
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
F0358_07275 (ribB)
00790 Folate biosynthesis
F0358_07275 (ribB)
Enzymes [BR:
ebv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
F0358_07275 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
F0358_07275 (ribB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
DUF6305
Motif
Other DBs
NCBI-ProteinID:
QES92530
LinkDB
All DBs
Position
complement(1575211..1576335)
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AA seq
374 aa
AA seq
DB search
MENRSSQLNTIEEALEDLKQGKVIIVVDDEDRENEGDFLCIAEFATPEVINFMVTHGRGL
VCTPLTQQRCKALGLDLMVGHNTAIYETNFTVSVDLQGHGCTTGISASDRSKTIQALIDE
NTNPDDLGKPGHIFPLISKDGGVLVRMGHTEAAVDLARMAGHYPAGCIVEILKEDGEMAR
LPELLEIAKKFDLKIISIEDLIAYRLENESLVKRIDEFPAKTKFGDYELIAYQQTTNNQV
HFALKKGKWTKDDVVPVRVKSTNSYYDLFSALQNGETPLLEKTMKIINEEGKGVVIFINN
IQNSELVEQKLEIFKSFSEGKSKSGVLPADEKDHGIGSQIIKDLGIQKMNLITRKIEEPH
TTQYGLEIIKCTQL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagatcatctcaattaaacacaattgaagaagctttagaagatttaaaacaa
ggaaaagttatcattgtagttgacgatgaagatcgtgaaaatgaaggagatttcctatgt
attgctgaatttgctacgccagaagtcatcaactttatggtgacacatggacgtggatta
gtttgtactccattaacacaacaaagatgtaaagctttaggtttagacctcatggttggt
cataatactgcgatttacgaaactaattttactgtatctgtcgatttacaaggacatgga
tgtacaacaggaatttccgcttcagatcgttctaaaactattcaggccttaatagatgaa
aatacaaatccagacgatttaggaaaaccgggacacatttttcctttaatctcaaaagac
ggaggtgttttagttcgtatgggacatactgaagccgcagttgatttggctcgcatggct
ggtcattatcctgccggatgtattgttgaaatcttgaaagaagatggagaaatggctcgt
cttcctgaattattagaaattgcaaagaaattcgatttaaaaattatttcaattgaagat
ttaattgcttaccgtttagaaaacgaatcgttagtaaaacgtattgatgagtttcctgca
aaaacaaaatttggagattacgaattgatcgcttatcagcaaacaacaaataatcaagtt
cactttgctttgaaaaaaggaaaatggacgaaagatgatgttgttccggtacgtgttaaa
tcgaccaacagctattacgatttgttcagtgctttacaaaacggtgaaacccctttactg
gaaaaaacaatgaagatcatcaacgaagaaggaaaaggtgttgttatatttattaacaat
attcaaaactctgaattggttgagcaaaagcttgaaatttttaaaagtttttctgaagga
aaatcaaaatcaggtgttctacctgctgacgagaaagatcacggaataggctctcaaatc
attaaagatttaggtattcagaaaatgaatttaattacccgaaagattgaagaaccacat
accacacaatatggtttagaaatcataaaatgtactcaattataa
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