Empedobacter brevis: F0358_07645
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Entry
F0358_07645 CDS
T06196
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ebv03016
]
F0358_07645 (miaB)
Enzymes [BR:
ebv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
F0358_07645 (miaB)
Transfer RNA biogenesis [BR:
ebv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
F0358_07645 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QES92601
LinkDB
All DBs
Position
complement(1652409..1653854)
Genome browser
AA seq
481 aa
AA seq
DB search
MHTEEKHIDEARQGEALMTAPTRNATKKLFLESYGCQMNFSDSEIVASILNNEGYQTTQK
VDEADLILLNTCSIREKAEQTVRKRLGTLNAIKKQNPSLKIGVLGCMAERLKHKFLEEEH
LVDIVVGPDAYRDLPNLINDVEDGRDAVNVQLSKEETYAEISPVRLGGNGVTAFVTITRG
CDNMCTFCVVPFTRGRERSRDPHSILNECKELAESGYKEITLLGQNVDSYLWYGGGPKKD
FKNATEIQKATAVDFAQLLDMVATQFPTIRLRFSTSNPQDMEEGVLEMMAKHKNICKYIH
LPVQSGSTTVLARMNRQHTREEYFELIDKIRRIVPDCALSHDMIAGFCGETEEEHKDTLS
LMEYVKYDFGYMFAYSERPGTPAHKKMPDDVLPEDKKRRLQEIIELQQKHSAERMNSYVG
KVHEVLIEGNSKRDDKFWYGRNTQNAVLVFPKVEGTKIGDFVNVKANSCTTATLIGEMVE
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagaagaaaaacatatagatgaagcaagacaaggagaagctttaatgactgct
ccgacacgtaatgcaacaaagaaattattcttggaaagttacggatgtcaaatgaatttc
tcagatagtgaaattgttgcgtctattctaaataatgaaggttatcagactactcaaaaa
gttgatgaagcagatttaattcttttaaatacttgttctattcgtgaaaaagctgaacaa
actgttcgtaaacgtttagggacattaaatgccatcaaaaagcaaaacccaagtcttaaa
attggagttttgggttgtatggcagagcgtttaaaacataaatttttggaagaagaacat
ttagtagacattgttgttggtccggatgcttatcgcgatttaccgaacttaatcaatgat
gttgaagacggtcgtgatgcagtgaatgttcaattatcaaaagaagaaacttatgctgag
atttctcctgttcgtttaggcggaaacggcgtaacagctttcgttacaatcactcgtggt
tgtgataatatgtgtacattttgtgttgttcctttcacacgtgggcgcgaacgctctcgt
gacccgcattcaattttaaatgaatgtaaagaattagcagaatcaggttacaaagaaatt
acacttttaggtcaaaacgtagactcgtatttatggtatggtggaggtccaaaaaaagat
ttcaagaatgccacagaaattcagaaagctactgctgttgattttgcacaattattagac
atggttgcgacacaatttccaactattcgtttacgtttttctacgtctaatccacaagat
atggaagaaggtgtattagaaatgatggcgaagcataaaaatatttgcaaatacattcac
ttaccagtacaatcaggttctacaactgttttagcacgtatgaatcgtcaacatacacgt
gaagaatattttgaattgatcgataaaattcgtcgtattgtcccagattgtgccttatct
cacgatatgattgctggtttctgcggagaaacagaagaagaacacaaagataccttatca
ttaatggaatatgtgaaatatgatttcggttatatgtttgcgtattctgaacgtcccgga
acacctgcacacaaaaaaatgccggatgatgttttaccggaagataaaaaacggcgttta
caagaaattatcgaattacaacaaaaacattcagcagaacgtatgaatagttatgttgga
aaagtgcatgaagttttaattgaaggaaattcaaaacgtgacgacaagttttggtatggc
cgtaatacgcaaaatgctgttttagtttttccaaaagtagaagggactaaaattggtgat
tttgttaacgtaaaagcaaatagctgtacaaccgctactttaattggtgaaatggttgaa
gcttaa
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