Empedobacter brevis: F0358_08410
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Entry
F0358_08410 CDS
T06196
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ebv
Empedobacter brevis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebv03400
]
F0358_08410
DNA repair and recombination proteins [BR:
ebv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
F0358_08410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA
AAA_22
AAA_10
ResIII
FtsK_SpoIIIE
TrwB_AAD_bind
Zot
AAA_30
Glyco_trans_4_5
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QES92732
LinkDB
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Position
1805991..1807520
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AA seq
509 aa
AA seq
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MNQKESFIQEMQSRYSYKNDKIVLGKAKLDGEIVEETEISVALKTMNRHGLIGGATGTGK
TKSLQIIAEQLSLKGVPTLLMDIKGDLSGIGAAANVADKNAQERMDSLNLPFEPQASPVE
LLSISDEPGVRLRATVSDFGPILFSKILELNETQESIISIIFKYCEDRNLPLIDLEDIRR
VLQYVTDSDEGKLELNSNYGTIAPASLGAILRKIVALEQQGAAKFFGEPSFDVQDLLKTK
DGKGIVNIIRLIDIQNQPNLFSTFMLSLLNKIYSQFPESGDSDRPKLVIFIDEAHLIFKE
ATKALLNQIETMVKLIRSKGVGLYFVTQVPGDVPDAVLSQLGLKVQHALRGFTAKDRKEI
TKAIENYPTTTYYKANEVITQLGIGEAFVTALDEKGIPTPLAYTYMRAPNSRMDVLTSDE
INSIVSNSDLVNKYATEVNRQSANEILSQKLEQQKENEKPTTKTAPTKRIPKEKDWTDNP
MVRDVSRTATRKLIDLGMKILTNFLKGKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaagagagctttattcaagaaatgcaaagtcgttattcttataaaaatgat
aaaatagttttaggaaaagcgaagttagatggagaaattgtggaagaaaccgagatttcg
gtagctcttaaaacaatgaatcgtcatggtttaataggcggagcaacaggaacgggtaaa
acaaaatctttgcagattatagcagaacaactttctttaaaaggagttccaacattgttg
atggatatcaaaggagatttgtctggaatcggtgcagctgcaaatgtggctgataaaaat
gcacaggagagaatggactcgttgaatttgccatttgaacctcaggcttcaccagtagaa
ttattatcaatttctgacgagcccggagtaagattacgtgcgactgtaagtgattttggt
ccaatcttgttcagtaaaattttagagctgaatgaaacacaagaaagtattatctcgatt
atattcaaatattgtgaagaccggaatttgccattaattgatttagaagatattcgacgt
gttttacaatatgtaacagattctgatgaaggaaagttggaattaaattccaattatgga
acaattgctccggcttcattgggagctattttacgtaaaattgttgcgttggaacaacaa
ggtgctgctaaattttttggagagccaagttttgatgtacaagatttgttgaaaacaaaa
gatgggaaaggaattgttaatatcattcggttgattgatattcagaatcagccgaacttg
ttttcaacttttatgttgagtttattaaataaaatttattcccagtttccggaatctgga
gattccgacagacccaaattagttatttttattgatgaggctcatttgatttttaaagaa
gcgaccaaagctttattaaatcaaatcgagacaatggtgaaattaattcgttcaaaggga
gtaggtttatattttgtcactcaagttcccggtgatgttcctgatgctgtcttgagtcaa
ttagggttgaaggttcaacatgctttaagaggttttaccgcaaaagaccgtaaagaaatt
acaaaagcgattgaaaattatccgacaacaacttattataaagcaaatgaggttattact
cagttaggtattggagaggcatttgtgactgctttagatgagaaaggtatcccaactcct
ttggcttatacgtatatgagagcacctaactcgagaatggatgtattgacatctgatgaa
attaatagcatcgtttcaaattcagatttggtcaataaatatgcgacagaagtaaataga
caatctgcaaatgaaatattgtctcagaaattagagcaacagaaagaaaacgaaaaacct
actactaaaacagccccaacaaaaagaattccgaaagaaaaagattggactgataatccg
atggtaagagatgtaagtcgtactgctacacggaaattgattgatctgggaatgaagata
ttaactaattttttaaaaggaaaaaaataa
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